MiMeDB: Showing metabocard for PC(18:0/20:3(5Z,8Z,11Z)) (MMDBc0000622)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2020-12-10 18:51:19 UTC

Update Date

2022-08-31 06:10:31 UTC

Metabolite ID

MMDBc0000622

Metabolite Identification

Common Name

PC(18:0/20:3(5Z,8Z,11Z))

Description

PC(18:0/20:3(5Z,8Z,11Z)) is a phosphatidylchloline (PC). It is a glycerophospholipid in which a phosphorylcholine moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidylcholines can have many different combinations of fatty acids of varying lengths and saturation attached to the C-1 and C-2 positions. PC(18:0/20:3(5Z,8Z,11Z)) in particular, consists of one hexadecanoyl chain to the C-1 atom, and one 5Z,8Z,11Z-eicosatrienoyl chain to the C-2 atom. In E. coli, PCs can be found in the integral component of the cell outer membrane. They are hydrolyzed by Phospholipases to a 2-acylglycerophosphocholine and a carboxylate.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 02231222002D          

 57 56  0  0  1  0            999 V2000
   17.7815   -8.9622    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0762   -9.3693    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   16.3711   -8.9622    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4866   -9.3693    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.6659   -9.3693    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.0762  -10.1836    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.1918   -8.9622    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   19.5990   -9.6673    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
   18.7847   -8.2570    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.8969   -8.5550    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.6021   -8.9622    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.3073   -8.5550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.0125   -8.9622    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   21.6053   -9.6673    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.6651   -8.1096    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.7177   -9.3693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8053   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5198   -8.9568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2343   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9487   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6632   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3777   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0922   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8067   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5211   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2356   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9501   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6646   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3791   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0936   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8080   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5225   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2370   -9.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9514   -8.9569    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9514   -8.1318    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7867  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5012  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2157  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9302  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6447  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3591  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0736  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7881  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5025  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2170  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9315  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6459  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3604  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0749  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7894  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5039  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2184  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9328  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.6473  -10.1836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.3618  -10.5961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.3618  -11.4211    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.0225   -9.9787    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  2  1  0  0  0  0
  1  4  1  0  0  0  0
  3  5  1  0  0  0  0
  2  6  1  6  0  0  0
  4  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  7 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 13 16  1  0  0  0  0
 18 17  1  0  0  0  0
 19 18  1  0  0  0  0
 20 19  1  0  0  0  0
 21 20  1  0  0  0  0
 22 21  1  0  0  0  0
 23 22  1  0  0  0  0
 24 23  1  0  0  0  0
 25 24  1  0  0  0  0
 26 25  1  0  0  0  0
 27 26  1  0  0  0  0
 28 27  1  0  0  0  0
 29 28  1  0  0  0  0
 30 29  1  0  0  0  0
 31 30  1  0  0  0  0
 32 31  1  0  0  0  0
 33 32  1  0  0  0  0
 34 33  1  0  0  0  0
 35 34  2  0  0  0  0
  5 34  1  0  0  0  0
 36 37  1  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  2  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  2  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55  6  1  0  0  0  0
 55 56  2  0  0  0  0
  2 57  1  1  0  0  0
M  CHG  2   8  -1  13   1
M  END

HMDB0008046
     RDKit          3D
PC(18:0/20:3(5Z,8Z,11Z))
142141  0  0  0  0  0  0  0  0999 V2000
   -0.5101  -12.0043    0.1934 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3329  -10.7061   -0.5976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5705  -10.5594   -1.4429 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5555   -9.3230   -2.2839 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4494   -8.1119   -1.3857 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5641   -7.9773   -0.4117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5095   -6.7810    0.4854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5347   -5.4769   -0.2847 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5191   -4.3614    0.6545 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5908   -3.4510    0.6939 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4348   -3.5087   -0.2576 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4425   -2.3650   -1.1819 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4816   -1.4751   -1.2371 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6877   -1.4276   -0.4061 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9323   -1.4887   -1.1895 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8536   -2.3688   -0.9992 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7911   -3.4195    0.0212 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9805   -3.2662    0.9901 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9002   -1.9243    1.6939 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6847   -1.8530    2.5392 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0648   -2.9274    2.7615 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1731   -0.6939    3.1072 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9919   -0.7497    3.9307 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8089   -0.1201    3.3315 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8713    1.2671    3.0484 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2054    1.8885    2.4510 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2042    1.1424    2.1794 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2878    3.2866    2.1175 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5291    3.4927    0.6059 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7007    2.9286   -0.0714 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6713    2.9745   -1.5569 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4497    4.3922   -2.1142 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5103    5.3154   -1.6602 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4681    6.7369   -2.0672 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5310    7.1089   -3.4731 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4812    6.7902   -4.4531 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8820    7.3858   -4.1422 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8182    7.1053   -5.2547 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2135    5.7093   -5.5523 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0516    5.0700   -4.4380 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4491    3.6836   -4.9552 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3628    2.9399   -4.0572 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8785    2.6192   -2.6906 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6658    1.7385   -2.6682 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3803   -0.2936    5.3081 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8979    0.9754    5.3172 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3844    1.5476    6.8101 P   0  0  0  0  0  5  0  0  0  0  0  0
    4.5591    2.5098    6.5568 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9740    0.3607    7.8379 O   0  0  0  0  0  1  0  0  0  0  0  0
    2.1587    2.4510    7.5909 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.8290    3.5370    6.7518 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7620    4.3230    7.4444 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2914    5.4725    6.7306 N   0  0  0  0  0  4  0  0  0  0  0  0
    0.2506    6.6614    7.5678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1108    5.1732    6.3687 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9623    5.7549    5.4987 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6781  -12.8213   -0.5413 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4104  -11.9498    0.8299 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3509  -12.1901    0.8654 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2132   -9.9023    0.1464 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5864  -10.8648   -1.2214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5721  -11.4268   -2.1435 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4483  -10.5485   -0.7876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6093   -9.3093   -2.8998 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4490   -9.2906   -2.9377 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4115   -7.1693   -2.0104 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4580   -8.1740   -0.9116 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5558   -7.9789   -0.9206 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6099   -8.8689    0.2798 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6262   -6.8102    1.1581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3964   -6.8328    1.1456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8822   -5.4386   -1.1446 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5939   -5.4678   -0.7477 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3732   -4.3224    1.3683 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6284   -2.6135    1.4337 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2980   -4.4764   -0.7407 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4610   -3.4317    0.4341 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3398   -2.2954   -1.8819 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3935   -0.6314   -1.9863 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6774   -1.9861    0.5227 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6920   -0.3316   -0.0145 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0563   -0.7209   -1.9748 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7915   -2.3838   -1.6270 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0127   -4.3974   -0.5093 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8456   -3.5756    0.5318 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8691   -4.0685    1.7361 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9198   -3.3789    0.4518 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7740   -1.8559    2.3692 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9785   -1.0804    1.0055 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7218   -1.8615    4.0274 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4950   -0.6000    2.3712 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0916   -0.2498    4.0069 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6230    3.8686    2.3862 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1683    3.7348    2.6394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4548    2.9408    0.3632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6431    4.5728    0.4018 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7614    1.8587    0.2941 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5936    3.4168    0.3753 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7345    2.7247   -1.8893 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0303    2.2409   -2.0221 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5637    4.6748   -1.7750 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4237    4.2738   -3.2132 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5476    4.8944   -1.9066 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  CHG  2  49  -1  53   1
M  END


  Mrv0541 02231222002D          

 57 56  0  0  1  0            999 V2000
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 54 55  1  0  0  0  0
 55  6  1  0  0  0  0
 55 56  2  0  0  0  0
  2 57  1  1  0  0  0
M  CHG  2   8  -1  13   1
M  END
> <DATABASE_ID>
MMDBc0000622

> <DATABASE_NAME>
MIME

> <SMILES>
CCCCCCCCCCCCCCCCCC(=O)OC[C@]([H])(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C46H86NO8P/c1-6-8-10-12-14-16-18-20-22-23-25-27-29-31-33-35-37-39-46(49)55-44(43-54-56(50,51)53-41-40-47(3,4)5)42-52-45(48)38-36-34-32-30-28-26-24-21-19-17-15-13-11-9-7-2/h20,22,25,27,31,33,44H,6-19,21,23-24,26,28-30,32,34-43H2,1-5H3/b22-20-,27-25-,33-31-/t44-/m1/s1

> <INCHI_KEY>
QXDDDGCNWRUEFM-UMKMFDOBSA-N

> <FORMULA>
C46H86NO8P

> <MOLECULAR_WEIGHT>
812.1507

> <EXACT_MASS>
811.609105245

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_AVERAGE_POLARIZABILITY>
100.4883924035557

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2-{[(2R)-2-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]-3-(octadecanoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium

> <ALOGPS_LOGP>
6.10

> <JCHEM_LOGP>
9.695443399194918

> <ALOGPS_LOGS>
-7.57

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8550572064466984

> <JCHEM_PKA_STRONGEST_BASIC>
-6.744217246680168

> <JCHEM_POLAR_SURFACE_AREA>
111.19

> <JCHEM_REFRACTIVITY>
246.82090000000008

> <JCHEM_ROTATABLE_BOND_COUNT>
43

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
2.31e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
lecithin

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0008046
     RDKit          3D
PC(18:0/20:3(5Z,8Z,11Z))
142141  0  0  0  0  0  0  0  0999 V2000
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M  CHG  2  49  -1  53   1
M  END

HEADER    PROTEIN                                 23-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-FEB-12         0                                  
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HETATM   41  C   UNK     0      11.870 -19.009   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      13.204 -19.779   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      14.538 -19.009   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      15.871 -19.779   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      17.205 -19.779   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      18.539 -19.009   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      19.872 -19.779   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      21.206 -19.779   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      22.540 -19.009   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      23.874 -19.779   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      25.207 -19.779   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      26.541 -19.009   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      27.875 -19.779   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      29.208 -19.009   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      30.542 -19.779   0.000  0.00  0.00           C+0
HETATM   56  O   UNK     0      30.542 -21.319   0.000  0.00  0.00           O+0
HETATM   57  H   UNK     0      33.642 -18.627   0.000  0.00  0.00           H+0
CONECT    1    2    4                                                       
CONECT    2    1    3    6   57                                             
CONECT    3    2    5                                                       
CONECT    4    1    7                                                       
CONECT    5    3   34                                                       
CONECT    6    2   55                                                       
CONECT    7    4    8    9   10                                             
CONECT    8    7                                                            
CONECT    9    7                                                            
CONECT   10    7   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15   16                                             
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   13                                                            
CONECT   17   18                                                            
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35    5                                                  
CONECT   35   34                                                            
CONECT   36   37                                                            
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54    6   56                                                  
CONECT   56   55                                                            
CONECT   57    2                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  112    0
END

COMPND    HMDB0008046
HETATM    1  C1  UNL     1      -0.510 -12.004   0.193  1.00  0.00           C  
HETATM    2  C2  UNL     1      -0.333 -10.706  -0.598  1.00  0.00           C  
HETATM    3  C3  UNL     1      -1.571 -10.559  -1.443  1.00  0.00           C  
HETATM    4  C4  UNL     1      -1.556  -9.323  -2.284  1.00  0.00           C  
HETATM    5  C5  UNL     1      -1.449  -8.112  -1.386  1.00  0.00           C  
HETATM    6  C6  UNL     1      -2.564  -7.977  -0.412  1.00  0.00           C  
HETATM    7  C7  UNL     1      -2.510  -6.781   0.485  1.00  0.00           C  
HETATM    8  C8  UNL     1      -2.535  -5.477  -0.285  1.00  0.00           C  
HETATM    9  C9  UNL     1      -2.519  -4.361   0.654  1.00  0.00           C  
HETATM   10  C10 UNL     1      -1.591  -3.451   0.694  1.00  0.00           C  
HETATM   11  C11 UNL     1      -0.435  -3.509  -0.258  1.00  0.00           C  
HETATM   12  C12 UNL     1      -0.443  -2.365  -1.182  1.00  0.00           C  
HETATM   13  C13 UNL     1       0.482  -1.475  -1.237  1.00  0.00           C  
HETATM   14  C14 UNL     1       1.688  -1.428  -0.406  1.00  0.00           C  
HETATM   15  C15 UNL     1       2.932  -1.489  -1.190  1.00  0.00           C  
HETATM   16  C16 UNL     1       3.854  -2.369  -0.999  1.00  0.00           C  
HETATM   17  C17 UNL     1       3.791  -3.419   0.021  1.00  0.00           C  
HETATM   18  C18 UNL     1       4.980  -3.266   0.990  1.00  0.00           C  
HETATM   19  C19 UNL     1       4.900  -1.924   1.694  1.00  0.00           C  
HETATM   20  C20 UNL     1       3.685  -1.853   2.539  1.00  0.00           C  
HETATM   21  O1  UNL     1       3.065  -2.927   2.761  1.00  0.00           O  
HETATM   22  O2  UNL     1       3.173  -0.694   3.107  1.00  0.00           O  
HETATM   23  C21 UNL     1       1.992  -0.750   3.931  1.00  0.00           C  
HETATM   24  C22 UNL     1       0.809  -0.120   3.331  1.00  0.00           C  
HETATM   25  O3  UNL     1       0.871   1.267   3.048  1.00  0.00           O  
HETATM   26  C23 UNL     1      -0.205   1.888   2.451  1.00  0.00           C  
HETATM   27  O4  UNL     1      -1.204   1.142   2.179  1.00  0.00           O  
HETATM   28  C24 UNL     1      -0.288   3.287   2.117  1.00  0.00           C  
HETATM   29  C25 UNL     1      -0.529   3.493   0.606  1.00  0.00           C  
HETATM   30  C26 UNL     1       0.701   2.929  -0.071  1.00  0.00           C  
HETATM   31  C27 UNL     1       0.671   2.975  -1.557  1.00  0.00           C  
HETATM   32  C28 UNL     1       0.450   4.392  -2.114  1.00  0.00           C  
HETATM   33  C29 UNL     1       1.510   5.315  -1.660  1.00  0.00           C  
HETATM   34  C30 UNL     1       1.468   6.737  -2.067  1.00  0.00           C  
HETATM   35  C31 UNL     1       1.531   7.109  -3.473  1.00  0.00           C  
HETATM   36  C32 UNL     1       0.481   6.790  -4.453  1.00  0.00           C  
HETATM   37  C33 UNL     1      -0.882   7.386  -4.142  1.00  0.00           C  
HETATM   38  C34 UNL     1      -1.818   7.105  -5.255  1.00  0.00           C  
HETATM   39  C35 UNL     1      -2.213   5.709  -5.552  1.00  0.00           C  
HETATM   40  C36 UNL     1      -3.052   5.070  -4.438  1.00  0.00           C  
HETATM   41  C37 UNL     1      -3.449   3.684  -4.955  1.00  0.00           C  
HETATM   42  C38 UNL     1      -4.363   2.940  -4.057  1.00  0.00           C  
HETATM   43  C39 UNL     1      -3.879   2.619  -2.691  1.00  0.00           C  
HETATM   44  C40 UNL     1      -2.666   1.738  -2.668  1.00  0.00           C  
HETATM   45  C41 UNL     1       2.380  -0.294   5.308  1.00  0.00           C  
HETATM   46  O5  UNL     1       2.898   0.975   5.317  1.00  0.00           O  
HETATM   47  P1  UNL     1       3.384   1.548   6.810  1.00  0.00           P  
HETATM   48  O6  UNL     1       4.559   2.510   6.557  1.00  0.00           O  
HETATM   49  O7  UNL     1       3.974   0.361   7.838  1.00  0.00           O1-
HETATM   50  O8  UNL     1       2.159   2.451   7.591  1.00  0.00           O  
HETATM   51  C42 UNL     1       1.829   3.537   6.752  1.00  0.00           C  
HETATM   52  C43 UNL     1       0.762   4.323   7.444  1.00  0.00           C  
HETATM   53  N1  UNL     1       0.291   5.473   6.731  1.00  0.00           N1+
HETATM   54  C44 UNL     1       0.251   6.661   7.568  1.00  0.00           C  
HETATM   55  C45 UNL     1      -1.111   5.173   6.369  1.00  0.00           C  
HETATM   56  C46 UNL     1       0.962   5.755   5.499  1.00  0.00           C  
HETATM   57  H1  UNL     1      -0.678 -12.821  -0.541  1.00  0.00           H  
HETATM   58  H2  UNL     1      -1.410 -11.950   0.830  1.00  0.00           H  
HETATM   59  H3  UNL     1       0.351 -12.190   0.865  1.00  0.00           H  
HETATM   60  H4  UNL     1      -0.213  -9.902   0.146  1.00  0.00           H  
HETATM   61  H5  UNL     1       0.586 -10.865  -1.221  1.00  0.00           H  
HETATM   62  H6  UNL     1      -1.572 -11.427  -2.144  1.00  0.00           H  
HETATM   63  H7  UNL     1      -2.448 -10.548  -0.788  1.00  0.00           H  
HETATM   64  H8  UNL     1      -0.609  -9.309  -2.900  1.00  0.00           H  
HETATM   65  H9  UNL     1      -2.449  -9.291  -2.938  1.00  0.00           H  
HETATM   66  H10 UNL     1      -1.412  -7.169  -2.010  1.00  0.00           H  
HETATM   67  H11 UNL     1      -0.458  -8.174  -0.912  1.00  0.00           H  
HETATM   68  H12 UNL     1      -3.556  -7.979  -0.921  1.00  0.00           H  
HETATM   69  H13 UNL     1      -2.610  -8.869   0.280  1.00  0.00           H  
HETATM   70  H14 UNL     1      -1.626  -6.810   1.158  1.00  0.00           H  
HETATM   71  H15 UNL     1      -3.396  -6.833   1.146  1.00  0.00           H  
HETATM   72  H16 UNL     1      -1.882  -5.439  -1.145  1.00  0.00           H  
HETATM   73  H17 UNL     1      -3.594  -5.468  -0.748  1.00  0.00           H  
HETATM   74  H18 UNL     1      -3.373  -4.322   1.368  1.00  0.00           H  
HETATM   75  H19 UNL     1      -1.628  -2.614   1.434  1.00  0.00           H  
HETATM   76  H20 UNL     1      -0.298  -4.476  -0.741  1.00  0.00           H  
HETATM   77  H21 UNL     1       0.461  -3.432   0.434  1.00  0.00           H  
HETATM   78  H22 UNL     1      -1.340  -2.295  -1.882  1.00  0.00           H  
HETATM   79  H23 UNL     1       0.393  -0.631  -1.986  1.00  0.00           H  
HETATM   80  H24 UNL     1       1.677  -1.986   0.523  1.00  0.00           H  
HETATM   81  H25 UNL     1       1.692  -0.332  -0.015  1.00  0.00           H  
HETATM   82  H26 UNL     1       3.056  -0.721  -1.975  1.00  0.00           H  
HETATM   83  H27 UNL     1       4.791  -2.384  -1.627  1.00  0.00           H  
HETATM   84  H28 UNL     1       4.013  -4.397  -0.509  1.00  0.00           H  
HETATM   85  H29 UNL     1       2.846  -3.576   0.532  1.00  0.00           H  
HETATM   86  H30 UNL     1       4.869  -4.069   1.736  1.00  0.00           H  
HETATM   87  H31 UNL     1       5.920  -3.379   0.452  1.00  0.00           H  
HETATM   88  H32 UNL     1       5.774  -1.856   2.369  1.00  0.00           H  
HETATM   89  H33 UNL     1       4.978  -1.080   1.005  1.00  0.00           H  
HETATM   90  H34 UNL     1       1.722  -1.862   4.027  1.00  0.00           H  
HETATM   91  H35 UNL     1       0.495  -0.600   2.371  1.00  0.00           H  
HETATM   92  H36 UNL     1      -0.092  -0.250   4.007  1.00  0.00           H  
HETATM   93  H37 UNL     1       0.623   3.869   2.386  1.00  0.00           H  
HETATM   94  H38 UNL     1      -1.168   3.735   2.639  1.00  0.00           H  
HETATM   95  H39 UNL     1      -1.455   2.941   0.363  1.00  0.00           H  
HETATM   96  H40 UNL     1      -0.643   4.573   0.402  1.00  0.00           H  
HETATM   97  H41 UNL     1       0.761   1.859   0.294  1.00  0.00           H  
HETATM   98  H42 UNL     1       1.594   3.417   0.375  1.00  0.00           H  
HETATM   99  H43 UNL     1       1.734   2.725  -1.889  1.00  0.00           H  
HETATM  100  H44 UNL     1       0.030   2.241  -2.022  1.00  0.00           H  
HETATM  101  H45 UNL     1      -0.564   4.675  -1.775  1.00  0.00           H  
HETATM  102  H46 UNL     1       0.424   4.274  -3.213  1.00  0.00           H  
HETATM  103  H47 UNL     1       2.548   4.894  -1.907  1.00  0.00           H  
HETATM  104  H48 UNL     1       1.528   5.232  -0.514  1.00  0.00           H  
HETATM  105  H49 UNL     1       0.639   7.289  -1.506  1.00  0.00           H  
HETATM  106  H50 UNL     1       2.389   7.223  -1.571  1.00  0.00           H  
HETATM  107  H51 UNL     1       2.486   6.603  -3.888  1.00  0.00           H  
HETATM  108  H52 UNL     1       1.848   8.212  -3.601  1.00  0.00           H  
HETATM  109  H53 UNL     1       0.378   5.782  -4.819  1.00  0.00           H  
HETATM  110  H54 UNL     1       0.790   7.379  -5.407  1.00  0.00           H  
HETATM  111  H55 UNL     1      -1.314   6.938  -3.217  1.00  0.00           H  
HETATM  112  H56 UNL     1      -0.800   8.475  -3.993  1.00  0.00           H  
HETATM  113  H57 UNL     1      -2.770   7.750  -5.123  1.00  0.00           H  
HETATM  114  H58 UNL     1      -1.431   7.532  -6.234  1.00  0.00           H  
HETATM  115  H59 UNL     1      -1.303   5.075  -5.664  1.00  0.00           H  
HETATM  116  H60 UNL     1      -2.788   5.716  -6.507  1.00  0.00           H  
HETATM  117  H61 UNL     1      -2.489   5.022  -3.499  1.00  0.00           H  
HETATM  118  H62 UNL     1      -3.989   5.630  -4.289  1.00  0.00           H  
HETATM  119  H63 UNL     1      -2.518   3.098  -5.203  1.00  0.00           H  
HETATM  120  H64 UNL     1      -3.993   3.871  -5.911  1.00  0.00           H  
HETATM  121  H65 UNL     1      -5.323   3.522  -4.005  1.00  0.00           H  
HETATM  122  H66 UNL     1      -4.648   1.991  -4.590  1.00  0.00           H  
HETATM  123  H67 UNL     1      -4.716   2.072  -2.169  1.00  0.00           H  
HETATM  124  H68 UNL     1      -3.729   3.537  -2.066  1.00  0.00           H  
HETATM  125  H69 UNL     1      -2.246   1.713  -1.635  1.00  0.00           H  
HETATM  126  H70 UNL     1      -2.953   0.684  -2.894  1.00  0.00           H  
HETATM  127  H71 UNL     1      -1.893   2.013  -3.407  1.00  0.00           H  
HETATM  128  H72 UNL     1       3.032  -1.056   5.778  1.00  0.00           H  
HETATM  129  H73 UNL     1       1.476  -0.253   5.989  1.00  0.00           H  
HETATM  130  H74 UNL     1       2.745   4.185   6.737  1.00  0.00           H  
HETATM  131  H75 UNL     1       1.554   3.125   5.787  1.00  0.00           H  
HETATM  132  H76 UNL     1       1.251   4.733   8.382  1.00  0.00           H  
HETATM  133  H77 UNL     1      -0.078   3.710   7.833  1.00  0.00           H  
HETATM  134  H78 UNL     1       1.048   7.367   7.210  1.00  0.00           H  
HETATM  135  H79 UNL     1       0.365   6.396   8.634  1.00  0.00           H  
HETATM  136  H80 UNL     1      -0.706   7.193   7.431  1.00  0.00           H  
HETATM  137  H81 UNL     1      -1.655   4.733   7.224  1.00  0.00           H  
HETATM  138  H82 UNL     1      -1.586   6.075   5.968  1.00  0.00           H  
HETATM  139  H83 UNL     1      -1.018   4.420   5.535  1.00  0.00           H  
HETATM  140  H84 UNL     1       1.766   5.061   5.222  1.00  0.00           H  
HETATM  141  H85 UNL     1       1.468   6.757   5.607  1.00  0.00           H  
HETATM  142  H86 UNL     1       0.244   5.912   4.651  1.00  0.00           H  
CONECT    1    2   57   58   59
CONECT    2    3   60   61
CONECT    3    4   62   63
CONECT    4    5   64   65
CONECT    5    6   66   67
CONECT    6    7   68   69
CONECT    7    8   70   71
CONECT    8    9   72   73
CONECT    9   10   10   74
CONECT   10   11   75
CONECT   11   12   76   77
CONECT   12   13   13   78
CONECT   13   14   79
CONECT   14   15   80   81
CONECT   15   16   16   82
CONECT   16   17   83
CONECT   17   18   84   85
CONECT   18   19   86   87
CONECT   19   20   88   89
CONECT   20   21   21   22
CONECT   22   23
CONECT   23   24   45   90
CONECT   24   25   91   92
CONECT   25   26
CONECT   26   27   27   28
CONECT   28   29   93   94
CONECT   29   30   95   96
CONECT   30   31   97   98
CONECT   31   32   99  100
CONECT   32   33  101  102
CONECT   33   34  103  104
CONECT   34   35  105  106
CONECT   35   36  107  108
CONECT   36   37  109  110
CONECT   37   38  111  112
CONECT   38   39  113  114
CONECT   39   40  115  116
CONECT   40   41  117  118
CONECT   41   42  119  120
CONECT   42   43  121  122
CONECT   43   44  123  124
CONECT   44  125  126  127
CONECT   45   46  128  129
CONECT   46   47
CONECT   47   48   48   49   50
CONECT   50   51
CONECT   51   52  130  131
CONECT   52   53  132  133
CONECT   53   54   55   56
CONECT   54  134  135  136
CONECT   55  137  138  139
CONECT   56  140  141  142
END

HMDB0008046
     RDKit          3D
PC(18:0/20:3(5Z,8Z,11Z))
142141  0  0  0  0  0  0  0  0999 V2000
   -0.5101  -12.0043    0.1934 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3329  -10.7061   -0.5976 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5705  -10.5594   -1.4429 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5555   -9.3230   -2.2839 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4494   -8.1119   -1.3857 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5641   -7.9773   -0.4117 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5095   -6.7810    0.4854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5347   -5.4769   -0.2847 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5191   -4.3614    0.6545 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  CHG  2  49  -1  53   1
M  END

Synonyms

Value	Source
1-Stearoyl-2-meadoyl-GPC	ChEBI
1-Stearoyl-2-meadoyl-GPC (18:0/20:3n9)	ChEBI
1-Stearoyl-2-meadoyl-sn-glycero-3-phosphocholine	ChEBI
GPC(18:0/20:3n9)	ChEBI
GPCho(18:0/20:3)	ChEBI
GPCho(18:0/20:3n9)	ChEBI
GPCho(18:0/20:3W9)	ChEBI
PC(18:0/20:3)	ChEBI
PC(18:0/20:3n9)	ChEBI
PC(18:0/20:3W9)	ChEBI
PC(38:3)	ChEBI
Phosphatidylcholine(18:0/20:3)	ChEBI
Phosphatidylcholine(18:0/20:3n9)	ChEBI
Phosphatidylcholine(18:0/20:3W9)	ChEBI
Phosphatidylcholine(38:3)	ChEBI
GPCho(38:3)	HMDB
Lecithin	HMDB
1-Octadecanoyl-2-(5Z,8Z,11Z-eicosatrienoyl)-sn-glycero-3-phosphocholine	HMDB
PC(18:0/20:3(5Z,8Z,11Z))	Lipid Annotator

Molecular Formula

C₄₆H₈₆NO₈P

Average Mass

812.1507

Monoisotopic Mass

811.609105245

IUPAC Name

(2-{[(2R)-2-[(5Z,8Z,11Z)-icosa-5,8,11-trienoyloxy]-3-(octadecanoyloxy)propyl phosphonato]oxy}ethyl)trimethylazanium

Traditional Name

lecithin

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCCCCC(=O)OC[C@]([H])(COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCC\C=C/C\C=C/C\C=C/CCCCCCCC

InChI Identifier

InChI=1S/C46H86NO8P/c1-6-8-10-12-14-16-18-20-22-23-25-27-29-31-33-35-37-39-46(49)55-44(43-54-56(50,51)53-41-40-47(3,4)5)42-52-45(48)38-36-34-32-30-28-26-24-21-19-17-15-13-11-9-7-2/h20,22,25,27,31,33,44H,6-19,21,23-24,26,28-30,32,34-43H2,1-5H3/b22-20-,27-25-,33-31-/t44-/m1/s1

InChI Key

QXDDDGCNWRUEFM-UMKMFDOBSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phosphatidylcholines. These are glycerophosphocholines in which the two free -OH are attached to one fatty acid each through an ester linkage.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Glycerophospholipids

Sub Class

Glycerophosphocholines

Direct Parent

Phosphatidylcholines

Alternative Parents

Substituents

Diacylglycero-3-phosphocholine
Phosphocholine
Fatty acid ester
Dialkyl phosphate
Dicarboxylic acid or derivatives
Organic phosphoric acid derivative
Phosphoric acid ester
Alkyl phosphate
Fatty acyl
Quaternary ammonium salt
Tetraalkylammonium salt
Carboxylic acid ester
Carboxylic acid derivative
Organic oxygen compound
Organic nitrogen compound
Carbonyl group
Organooxygen compound
Organonitrogen compound
Organic oxide
Organopnictogen compound
Amine
Organic salt
Hydrocarbon derivative
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

phosphatidylcholine 38:3 (CHEBI:86176 )
Diacylglycerophosphocholines (LMGP01010796 )

Functional Ontology

Not Available

Physical Properties

State

Expected Solid

Predicted Properties

Property	Value	Source
Water Solubility	2.3e-05 g/L	ALOGPS
logP	6.1	ALOGPS
logP	9.7	ChemAxon
logS	-7.6	ALOGPS
pKa (Strongest Acidic)	1.86	ChemAxon
pKa (Strongest Basic)	-6.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	111.19 Å²	ChemAxon
Rotatable Bond Count	43	ChemAxon
Refractivity	246.82 m³·mol⁻¹	ChemAxon
Polarizability	100.49 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Spectra

Spectrum Type	Description	Splash Key	Deposition Date	View
Predicted GC-MS	Predicted GC-MS Spectrum - GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-13	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-000i-8092041220-48d508a57a6862216f8d	2017-09-01	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-000i-3192011100-93f320ab90c4a48661bd	2017-09-01	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-000i-6094002100-48cfe13e868ba72fb2db	2017-09-01	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-07cr-0092000030-0b1f4f463dc21338ae14	2017-09-01	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-00lr-0090000100-4e1b558d546d645a72f0	2017-09-01	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-0as0-4092000000-989d39fede78f4259403	2017-09-01	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-03di-0000000090-6fea64f934a34fc28e70	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-03di-0074004290-b490bbdf8bbd4f6c6ddd	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-053r-5191100000-a3c191b1e9a9d4335526	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-014i-0000000090-5004d6181bff1df70870	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-014i-0000000190-fc85ca9ecf02ec9d7566	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0f80-0200498220-b48732ec4f342347a388	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-03di-0000000090-5d09de4c7b02b1d770be	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-03e9-0600000090-3e7228ae930b29d5cacb	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-001i-1900041210-5b073d72824ccc2c8072	2021-09-22	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Positive	splash10-001i-0000000090-5cb49c7c039e3d7fca35	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Positive	splash10-001i-0000000190-e562dcc8ad422ebb1e79	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Positive	splash10-0udk-0900369110-92f4d074ef785d65746e	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 10V, Negative	splash10-0002-0000000090-b1ba273f95f6293d0145	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 20V, Negative	splash10-0002-0011000090-b6715afe99e648d02468	2021-09-24	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 40V, Negative	splash10-0a62-0099000090-0392a5d79eec0d08f233	2021-09-24	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-22	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)		2022-08-22	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

All Tissues
Blood
Feces
Saliva
Urine

Tissue Locations

All Tissues

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species
MMDBp0191730	Acyl-protein thioesterase 1	Enzyme	O75608	Homo sapiens
MMDBp0191731	Group XV phospholipase A2	Unknown	Q8NCC3	Homo sapiens
MMDBp0191732	Calcium-dependent phospholipase A2	Unknown	P39877	Homo sapiens
MMDBp0191733	Group IIF secretory phospholipase A2	Unknown	Q9BZM2	Homo sapiens
MMDBp0191734	Cytosolic phospholipase A2	Unknown	P47712	Homo sapiens
MMDBp0191735	Phospholipase A2	Unknown	P04054	Homo sapiens
MMDBp0191736	Group XIIB secretory phospholipase A2-like protein	Unknown	Q9BX93	Homo sapiens
MMDBp0191737	Group 10 secretory phospholipase A2	Unknown	O15496	Homo sapiens
MMDBp0191739	Group IIE secretory phospholipase A2	Unknown	Q9NZK7	Homo sapiens
MMDBp0191740	Acyl-protein thioesterase 2	Enzyme	O95372	Homo sapiens
MMDBp0191741	Group XIIA secretory phospholipase A2	Unknown	Q9BZM1	Homo sapiens
MMDBp0191742	85/88 kDa calcium-independent phospholipase A2	Unknown	O60733	Homo sapiens
MMDBp0191743	Phosphatidylcholine-sterol acyltransferase	Enzyme	P04180	Homo sapiens
MMDBp0191744	Eosinophil lysophospholipase	Enzyme	Q05315	Homo sapiens
MMDBp0191745	Phospholipase A2, membrane associated	Unknown	P14555	Homo sapiens
MMDBp0191746	Group IID secretory phospholipase A2	Unknown	Q9UNK4	Homo sapiens
MMDBp0191753	Phospholipase D2	Enzyme	O14939	Homo sapiens
MMDBp0191754	Phosphatidylethanolamine N-methyltransferase	Unknown	Q9UBM1	Homo sapiens
MMDBp0191755	Phospholipase D1	Unknown	Q13393	Homo sapiens
MMDBp0192178	Cytosolic phospholipase A2 gamma	Unknown	Q9UP65	Homo sapiens
MMDBp0192181	Group 3 secretory phospholipase A2	Unknown	Q9NZ20	Homo sapiens
MMDBp0192187	D-beta-hydroxybutyrate dehydrogenase, mitochondrial	Unknown	Q02338	Homo sapiens
MMDBp0192368	Choline-phosphate cytidylyltransferase B	Enzyme	Q9Y5K3	Homo sapiens
MMDBp0192379	Choline-phosphate cytidylyltransferase A	Enzyme	P49585	Homo sapiens
MMDBp0192391	Phosphatidylcholine:ceramide cholinephosphotransferase 2	Enzyme	Q8NHU3	Homo sapiens
MMDBp0192395	Phosphatidylcholine:ceramide cholinephosphotransferase 1	Enzyme	Q86VZ5	Homo sapiens
MMDBp0192398	Choline kinase alpha	Enzyme	P35790	Homo sapiens
MMDBp0192735	Probable phospholipid-transporting ATPase IG	Unknown	Q8NB49	Homo sapiens
MMDBp0192736	Probable phospholipid-transporting ATPase IH	Unknown	P98196	Homo sapiens
MMDBp0192769	Probable phospholipid-transporting ATPase VA	Unknown	O60312	Homo sapiens
MMDBp0192790	Probable phospholipid-transporting ATPase IC	Unknown	O43520	Homo sapiens
MMDBp0192817	Probable phospholipid-transporting ATPase IIA	Unknown	O75110	Homo sapiens
MMDBp0192834	Probable phospholipid-transporting ATPase VD	Unknown	Q9P241	Homo sapiens
MMDBp0192842	Probable phospholipid-transporting ATPase IB	Unknown	Q9NTI2	Homo sapiens
MMDBp0192939	Probable phospholipid-transporting ATPase IA	Unknown	Q9Y2Q0	Homo sapiens
MMDBp0193026	Probable phospholipid-transporting ATPase IM	Unknown	Q8TF62	Homo sapiens
MMDBp0193046	Probable phospholipid-transporting ATPase IF	Unknown	Q9Y2G3	Homo sapiens
MMDBp0193050	Probable phospholipid-transporting ATPase IK	Unknown	O60423	Homo sapiens
MMDBp0193193	Phosphatidylinositol transfer protein beta isoform	Unknown	P48739	Homo sapiens
MMDBp0193318	Multidrug resistance protein 3	Transporter	P21439	Homo sapiens
MMDBp0193325	Lecithin retinol acyltransferase	Enzyme	O95237	Homo sapiens
MMDBp0193358	Phospholipid scramblase 1	Unknown	O15162	Homo sapiens
MMDBp0193448	Phosphatidylserine synthase 1	Enzyme	P48651	Homo sapiens
MMDBp0193566	Phosphatidylinositol transfer protein alpha isoform	Unknown	Q00169	Homo sapiens
MMDBp0193576	Phospholipid transfer protein	Unknown	P55058	Homo sapiens
MMDBp0193702	Cholinephosphotransferase 1	Unknown	Q8WUD6	Homo sapiens
MMDBp0193807	2-acylglycerol O-acyltransferase 2	Enzyme	Q3SYC2	Homo sapiens
MMDBp0193913	Choline/ethanolaminephosphotransferase 1	Unknown	Q9Y6K0	Homo sapiens
MMDBp0193977	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3	Unknown	Q8N3E9	Homo sapiens
MMDBp0194083	Lysophospholipid acyltransferase 5	Enzyme	Q6P1A2	Homo sapiens
MMDBp0194084	Putative inactive group IIC secretory phospholipase A2	Unknown	Q5R387	Homo sapiens
MMDBp0194085	Lysophosphatidylcholine acyltransferase 1	Unknown	Q8NF37	Homo sapiens
MMDBp0194086	Lysophosphatidylcholine acyltransferase 2	Enzyme	Q7L5N7	Homo sapiens
MMDBp0194087	Phospholipase D3	Enzyme	Q8IV08	Homo sapiens
MMDBp0194088	Phospholipase D4	Enzyme	Q96BZ4	Homo sapiens
MMDBp0194089	Phosphatidylcholine transfer protein	Unknown	Q9UKL6	Homo sapiens
MMDBp0194090	Phospholipid scramblase 2	Unknown	Q9NRY7	Homo sapiens
MMDBp0194091	Phospholipid scramblase 3	Unknown	Q9NRY6	Homo sapiens
MMDBp0194092	Phospholipid scramblase 4	Unknown	Q9NRQ2	Homo sapiens
MMDBp0194093	Phospholipid scramblase family member 5	Unknown	A0PG75	Homo sapiens
MMDBp0194094	Probable phospholipid-transporting ATPase VB	Unknown	O94823	Homo sapiens
MMDBp0194095	Probable phospholipid-transporting ATPase ID	Unknown	P98198	Homo sapiens
MMDBp0194097	Phospholipase B1, membrane-associated	Unknown	Q6P1J6	Homo sapiens
MMDBp0194100	Phosphatidylethanolamine-binding protein 1	Enzyme	P30086	Homo sapiens
MMDBp0194101	Phosphatidylethanolamine-binding protein 4	Enzyme	Q96S96	Homo sapiens
MMDBp0194130	Membrane-associated phosphatidylinositol transfer protein 1	Unknown	O00562	Homo sapiens
MMDBp0194131	Membrane-associated phosphatidylinositol transfer protein 2	Unknown	Q9BZ72	Homo sapiens
MMDBp0194132	Membrane-associated phosphatidylinositol transfer protein 3	Unknown	Q9BZ71	Homo sapiens
MMDBp0194634	Cytosolic phospholipase A2 delta	Unknown	Q86XP0	Homo sapiens
MMDBp0194635	Cytosolic phospholipase A2 epsilon	Unknown	Q3MJ16	Homo sapiens
MMDBp0194636	Cytosolic phospholipase A2 zeta	Unknown	Q68DD2	Homo sapiens
MMDBp0195076	ADP-ribosylation factor GTPase-activating protein 1	Unknown	Q8N6T3	Homo sapiens
MMDBp0195865	Cytosolic phospholipase A2 beta	Unknown	P0C869	Homo sapiens
MMDBp0196031	Phospholipase D1 variant	Enzyme	Q59EA4	Homo sapiens
MMDBp0196234	Phospholipase D6	Enzyme	Q8N2A8	Homo sapiens
MMDBp0196265	Neuropathy target esterase	Enzyme	Q8IY17	Homo sapiens
MMDBp0196502	Apolipoprotein A-V	Unknown	Q6Q788	Homo sapiens
MMDBp0196503	Uteroglobin	Unknown	P11684	Homo sapiens

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference
Obesity		Association	Human Blood	HMDB	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children
Obesity		Association	Human Blood	HMDB	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links
Bacteria	Actinobacteria	1	Human	Indirect association between microbiota composition and metabolites measured in host biospecimen
Eukaryota/Fungi	Ascomycota	1	Human feces; Human saliva	Unknown

Exposure Sources

Source Type	Activity	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference
Human Blood	Detected and Quantified	67.848	22.399			uM	Adult (>18 years old)	Female	Pregnancy	HMDB	24704061
Human Urine	Detected and Quantified	0.0056				umol/mmol creatinine	Adult (>18 years old)	Both	Normal	HMDB	24023812
Human Feces	Detected and Quantified	0.12	0.1			nmol/g wet feces	Adult (>18 years old)	Both	Normal	HMDB	27624970
Human Feces	Detected and Quantified	0.22	0.32			nmol/g wet feces	Adult (>18 years old)	Both	Normal	HMDB	27624970
Human Blood	Detected and Quantified	32.8		26.5	38.5	uM	Infant (0-1 year old)		Normal	HMDB	25754623
Human Blood	Detected and Quantified	36.1		31	41.9	uM	Newborn (0-30 days old)		Normal	HMDB	25754623
Human Blood	Detected and Quantified	47.3	11.3			uM	Adult (>18 years old)	Both	Normal	HMDB	28278231
Human Blood	Detected and Quantified	62.34	20.77			uM	Adult (>18 years old)	Both	Normal	HMDB	26010610
Human Blood	Detected and Quantified	43.5	14.2			uM	Children (1-13 years old)	Both	Obesity	HMDB	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children
Human Blood	Detected and Quantified	56.1	19.7			uM	Children (1-13 years old)	Both	Obesity	HMDB	Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children
Human Saliva	Detected and Quantified	0.050	0.009			uM	Adult (>18 years old)	Both	Normal	HMDB	https://doi.org/10.1007/s11306-015-0840-5
Human All tissues	Detected but not Quantified						Not Specified	Not Specified	Normal	HMDB	34986597

External Links

HMDB ID

HMDB0008046

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

24778855

PDB ID

Not Available

ChEBI ID

86176

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Noronha A, Modamio J, Jarosz Y, Guerard E, Sompairac N, Preciat G, Danielsdottir AD, Krecke M, Merten D, Haraldsdottir HS, Heinken A, Heirendt L, Magnusdottir S, Ravcheev DA, Sahoo S, Gawron P, Friscioni L, Garcia B, Prendergast M, Puente A, Rodrigues M, Roy A, Rouquaya M, Wiltgen L, Zagare A, John E, Krueger M, Kuperstein I, Zinovyev A, Schneider R, Fleming RMT, Thiele I: The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease. Nucleic Acids Res. 2019 Jan 8;47(D1):D614-D624. doi: 10.1093/nar/gky992. [PubMed:30371894 ]

Showing metabocard for PC(18:0/20:3(5Z,8Z,11Z)) (MMDBc0000622)

MOL for #<Metabolite:0x00007f536cec4200>

3D MOL for #<Metabolite:0x00007f536cec4200>

3D SDF for #<Metabolite:0x00007f536cec4200>

3D-SDF for #<Metabolite:0x00007f536cec4200>

PDB for #<Metabolite:0x00007f536cec4200>

3D PDB for #<Metabolite:0x00007f536cec4200>

SMILES for #<Metabolite:0x00007f536cec4200>

INCHI for #<Metabolite:0x00007f536cec4200>

Structure for #<Metabolite:0x00007f536cec4200>

3D Structure for #<Metabolite:0x00007f536cec4200>