Showing metabocard for 2-oxobutanoic acid (MMDBc0054184)

Record Information
Version2.0
StatusDetected and Quantified
Creation Date2022-06-05 22:57:51 UTC
Update Date2025-10-07 16:08:24 UTC
Metabolite IDMMDBc0054184
Metabolite Identification
Common Name2-oxobutanoic acid
Description2-oxobutanoic acid is a keto acid and an important intermediate in various metabolic pathways. Its chemical structure features a four-carbon backbone with a ketone functional group at the second carbon, making it a key player in the metabolism of amino acids and carbohydrates. In biological systems, 2-oxobutanoic acid is involved in the transamination reactions, contributing to the synthesis and degradation of amino acids. It is also linked to the citrate cycle, where it plays a role in energy production and metabolic regulation. For instance, studies have shown that 3-methyl-2-oxobutanoic acid, a related compound, was identified in cerebrospinal fluid samples from patients with TBEV infection, highlighting its involvement in metabolic pathways that differentiate disease states (PMID:39569456 ). Additionally, it has been noted that 4,4,4-trifluoro-2-oxobutanoic acid serves as a significant metabolite in the bacterial degradation of fipronil, indicating its relevance in environmental biochemistry (PMID:39549993 ). Furthermore, kinetic studies suggest that 4-methylthio-2-oxobutanoic acid is involved in enzymatic mechanisms that include acetyl-CoA, emphasizing its biochemical significance (PMID:39322014 ).
Structure
MOLSDFPDBSMILESInChI

MOL for #<Metabolite:0x00007f2e30771018>


  Mrv0541 02241222512D          

  7  6  0  0  0  0            999 V2000
    1.2375    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625    0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -0.7145    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5  7  2  0  0  0  0
M  CHG  1   6  -1
M  END
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3D MOL for #<Metabolite:0x00007f2e30771018>

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3D SDF for #<Metabolite:0x00007f2e30771018>

  Mrv0541 02241222512D          

  7  6  0  0  0  0            999 V2000
    1.2375    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625    0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -0.7145    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  5  7  2  0  0  0  0
M  CHG  1   6  -1
M  END
> <DATABASE_ID>
MMDBc0054184

> <DATABASE_NAME>
MIME

> <SMILES>
CCC(=O)C([O-])=O

> <INCHI_IDENTIFIER>
InChI=1S/C4H6O3/c1-2-3(5)4(6)7/h2H2,1H3,(H,6,7)/p-1

> <INCHI_KEY>
TYEYBOSBBBHJIV-UHFFFAOYSA-M

> <FORMULA>
C4H5O3

> <MOLECULAR_WEIGHT>
101.0807

> <EXACT_MASS>
101.023869026

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
8.797312378012258

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
-1

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-oxobutanoate

> <ALOGPS_LOGP>
-0.10

> <JCHEM_LOGP>
0.7664098003333332

> <ALOGPS_LOGS>
0.11

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.1869864284881544

> <JCHEM_PKA_STRONGEST_BASIC>
-9.650960797412663

> <JCHEM_POLAR_SURFACE_AREA>
57.199999999999996

> <JCHEM_REFRACTIVITY>
33.453700000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
1.54e+02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-oxobutanoate

> <JCHEM_VEBER_RULE>
0

$$$$

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3D-SDF for #<Metabolite:0x00007f2e30771018>
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PDB for #<Metabolite:0x00007f2e30771018>
HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0       2.310   4.001   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.540   2.667   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.310   1.334   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       3.850   1.334   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       1.540   0.000   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       2.310  -1.334   0.000  0.00  0.00           O-1
HETATM    7  O   UNK     0       0.000   0.000   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5                                                            
MASTER        0    0    0    0    0    0    0    0    7    0   12    0
END

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3D PDB for #<Metabolite:0x00007f2e30771018>
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SMILES for #<Metabolite:0x00007f2e30771018>
CCC(=O)C([O-])=O
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INCHI for #<Metabolite:0x00007f2e30771018>
InChI=1S/C4H6O3/c1-2-3(5)4(6)7/h2H2,1H3,(H,6,7)/p-1
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Synonyms
ValueSource
2-KetobutanoateChEBI
2-KetobutyrateChEBI
2-OxobutyrateChEBI
alpha-KetobutyrateChEBI
alpha-OxobutyrateChEBI
2-Ketobutanoic acidGenerator
2-Ketobutyric acidGenerator
2-Oxobutyric acidGenerator
a-KetobutyrateGenerator
a-Ketobutyric acidGenerator
alpha-Ketobutyric acidGenerator
Α-ketobutyrateGenerator
Α-ketobutyric acidGenerator
a-OxobutyrateGenerator
a-Oxobutyric acidGenerator
alpha-Oxobutyric acidGenerator
Α-oxobutyrateGenerator
Α-oxobutyric acidGenerator
2-Oxobutanoic acidGenerator
Molecular FormulaC4H5O3
Average Mass101.0807
Monoisotopic Mass101.023869026
IUPAC Name2-oxobutanoate
Traditional Name2-oxobutanoate
CAS Registry NumberNot Available
SMILES
CCC(=O)C([O-])=O
InChI Identifier
InChI=1S/C4H6O3/c1-2-3(5)4(6)7/h2H2,1H3,(H,6,7)/p-1
InChI KeyTYEYBOSBBBHJIV-UHFFFAOYSA-M