MiMeDB: Bifidobacterium longum (MMDBm0000074)

Microbe Identification

Microbe name

Bifidobacterium longum

NCBI Taxonomy ID

216816

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Actinobacteria

Class

Actinobacteria

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Species

longum

Subspecies

infantis; longum

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

HostAssociated

Biotic relationship

Free living

Cell arrangement

Clusters - Pairs - Singles

Sporulation

Clusters - Pairs - Singles

Metabolism

Saccharolytic, fermentative

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human			Not Available	Human Oral Microbiome Database (HOMD)	20624719
Human	Gut	Feces	Not Available	GutFeeling KnowledgeBase	31509535
Human		Stool	Not Available	Human Microbiome Project	28953883
Human	Perianal space		Not Available	BacDive	34718743
Human	Rectum		Not Available	BacDive	34718743
Human	Gastrointestinal tract		Not Available	BacDive	34718743
Human	Large intestine		Not Available	BacDive	34718743
Human	Bronchi		Not Available	BacDive	34718743
Human	Vagina		Not Available	BacDive	34718743
Human	Oral cavity	Saliva	Not Available	Disbiome	31247001
Human	Vagina	Mucosa	Not Available	Disbiome	29791775
Human	Large intestine	Feces	Not Available	Disbiome	20603222

Health Effects

Host	Related Health Condition	Microbal response/effect	Data Source	Reference
Human	Parkinson's disease	Elevated	Disbiome	31247001
Human	Preterm birth	Reduced	Disbiome	29791775
Human	Autism	Reduced	Disbiome	20603222
Human	Cirrhosis	Reduced	Disbiome	21814872
Human	Crohn's disease	Reduced	Disbiome	30567928
Human	Lung Cancer	Reduced	Disbiome	32240032
Human	Obesity	Reduced	Disbiome	29379536
Human	Schizophrenia	Elevated	Disbiome	32235826
Human	Ulcerative colitis	Elevated	Disbiome	24021287
Human	Non-alcoholic fatty liver disease	Reduced	Disbiome	29379536
Human	Non-alcoholic fatty liver disease	Reduced	Disbiome	31726978

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024360	L-Valine	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024389	L-Leucine	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024418	L-Alanine	diphosphate	Alanine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024449	L-Methionine	diphosphate	Methionine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024474	L-Proline	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024483	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024522	Glycine	diphosphate	Glycine--tRNA ligase	Ligation	RHEA	34755880

Genome Data

Genome Link

MMDBm0000074

Genome Length

2419238 bp

# Predicted Proteins

1951

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:48:26 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_015067

MiMeDB ID	Organism	Strain	Serotype	Variant	NCBI Taxonomy	BaSyS2 Genome
MMDBm0000075	Bifidobacterium longum DJO10A	DJO10A	-	-	205913	View
MMDBm0000076	Bifidobacterium longum NCC2705	NCC2705	-	-	206672	View
MMDBm0000077	Bifidobacterium longum subsp. infantis	-	-	-	1682	View
MMDBm0000078	Bifidobacterium longum subsp. infantis 157F	157F	-	-	565040	View
MMDBm0000079	Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	ATCC 15697 = JCM 1222 = DSM 20088	-	-	391904	View
MMDBm0000080	Bifidobacterium longum subsp. longum	-	-	-	1679	View
MMDBm0000081	Bifidobacterium longum subsp. longum BBMN68	BBMN68	-	-	890402	View
MMDBm0000082	Bifidobacterium longum subsp. longum F8	F8	-	-	722911	View
MMDBm0000083	Bifidobacterium longum subsp. longum GT15	GT15	-	-	1300227	View
MMDBm0000084	Bifidobacterium longum subsp. longum JCM 1217	JCM 1217	-	-	565042	View
MMDBm0000085	Bifidobacterium longum subsp. longum JDM301	JDM301	-	-	759350	View
MMDBm0000086	Bifidobacterium longum subsp. longum KACC 91563	KACC 91563	-	-	1035817	View
MMDBm0648095	Bifidobacterium longum E18	E18	-	-	1322347	View
MMDBm0648097	Bifidobacterium longum subsp. infantis CCUG 52486	CCUG 52486	-	-	537937	View
MMDBm0648107	Bifidobacterium longum subsp. longum ATCC 55813	ATCC 55813	-	-	548480	View