MiMeDB: Fusobacterium nucleatum (MMDBm0001062)

Microbe Identification

Microbe name

Fusobacterium nucleatum

NCBI Taxonomy ID

851

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Fusobacteria

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Species

nucleatum

Subspecies

animalis; nucleatum; polymorphum; vincentii

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

HostAssociated

Biotic relationship

Free living

Cell arrangement

Not Available

Sporulation

Nonsporulating

Metabolism

Saccharolytic, proteolytic, fermentative

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human		Mucosa	Not Available	Human Microbiome Project	28953883
Human		Supragingival plaque	Not Available	Human Microbiome Project	28953883
Human			Not Available	Human Microbiome Project	28953883
Human	Tongue		Not Available	BacDive	34718743
Human	Gingiva		Not Available	BacDive	34718743
Human	Pharynx		Not Available	BacDive	34718743
Human	Bladder	Urine	Not Available	Disbiome	30108246
Human	Large intestine	Feces	Not Available	Disbiome	26691472
Human	Large intestine	Saliva	Not Available	Disbiome	30796823
Human	Gingiva	Subgingival plaque	Not Available	Disbiome	31480468
Human	Oral cavity	Saliva	Not Available	Disbiome	31489129

Health Effects

Host	Related Health Condition	Microbal response/effect	Data Source	Reference
Human	Bladder cancer	Elevated	Disbiome	30108246
Human	Colorectal cancer	Elevated	Disbiome	26691472
Human	Crohn's disease	Elevated	Disbiome	30796823
Human	Colorectal cancer	Elevated	Disbiome	26408641
Human	Colorectal cancer	Elevated	Disbiome	24811328
Human	Colorectal cancer	Elevated	Disbiome	27056827
Human	Colorectal cancer	Elevated	Disbiome	25432777
Human	Colorectal cancer	Elevated	Disbiome	31171880
Human	Colorectal cancer	Elevated	Disbiome	31971861
Human	Colorectal cancer	Elevated	Disbiome	32280686
Human	Colorectal cancer	Elevated	Disbiome	31025134
Human	Obesity	Elevated	Disbiome	19587155
Human	Obesity	Elevated	Disbiome	29576948
Human	Periodontal disease	Elevated	Disbiome	31329044
Human	Ulcerative colitis	Elevated	Disbiome	28039159
Human	Smoking	Elevated	Disbiome	31201984
Human	Smoking	Elevated	Disbiome	32105635
Human	Smoking	Elevated	Disbiome	25283067
Human	Smoking	Elevated	Disbiome	11394403

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024360	L-Valine	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024371	L-Asparagine	Hydrogen Ion	Asparagine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024389	L-Leucine	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024401	L-Serine	Adenosine 3',5'-diphosphate	Holo-[acyl-carrier-protein] synthase	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0024403	Hydrogen Ion	Carbon dioxide	3-oxoacyl-[acyl-carrier-protein] synthase 3	Synthesis	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024418	L-Alanine	diphosphate	Alanine--tRNA ligase	Ligation	RHEA	34755880

Genome Data

Genome Link

MMDBm0001062

Genome Length

2478028 bp

# Predicted Proteins

2406

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:47:58 UTC

Reference

PMID: 17704766

Source Links

GenBank

NZ_LN831027

MiMeDB ID	Organism	Strain	Serotype	Variant	NCBI Taxonomy	BaSyS2 Genome
MMDBm0000185	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	ATCC 25586	-	-	190304	View
MMDBm0416220	Fusobacterium nucleatum subsp. animalis	-	-	-	76859	View
MMDBm0416223	Fusobacterium nucleatum subsp. animalis 3_1_33	3_1_33	-	-	469603	View
MMDBm0416224	Fusobacterium nucleatum subsp. animalis 4_8	4_8	-	-	469607	View
MMDBm0416225	Fusobacterium nucleatum subsp. animalis 7_1	7_1	-	-	457405	View
MMDBm0416228	Fusobacterium nucleatum subsp. animalis D11	D11	-	-	556264	View
MMDBm0416230	Fusobacterium nucleatum subsp. nucleatum	-	-	-	76856	View
MMDBm0416233	Fusobacterium nucleatum subsp. polymorphum	-	-	-	76857	View
MMDBm0416236	Fusobacterium nucleatum subsp. vincentii	-	-	-	155615	View
MMDBm0416237	Fusobacterium nucleatum subsp. vincentii 3_1_27	3_1_27	-	-	469602	View
MMDBm0416238	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	3_1_36A2	-	-	469604	View
MMDBm0416239	Fusobacterium nucleatum subsp. vincentii 4_1_13	4_1_13	-	-	469606	View