MiMeDB: Klebsiella pneumoniae (MMDBm0001066)

Microbe Identification

Microbe name

Klebsiella pneumoniae

NCBI Taxonomy ID

573

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Species

pneumoniae

Subspecies

ozaenae; pneumoniae; rhinoscleromatis

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Yes

Flagellar presence

Number of membranes

Oxygen preference

Facultative anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

HostAssociated

Biotic relationship

Symbiotic

Cell arrangement

Chains - Pairs - Singles

Sporulation

Not Available

Metabolism

Fermentative or respiratory, various carbohydrates used

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human			Not Available	Human Oral Microbiome Database (HOMD)	20624719
Human	Nasal cavity		Not Available	BacDive	34718743
Human	Lung		Not Available	BacDive	34718743
Human	Nasopharynx		Not Available	BacDive	34718743
Human	Large intestine		Not Available	BacDive	34718743
Human	Rectum		Not Available	BacDive	34718743
Human	Lower respiratory tract		Not Available	BacDive	34718743
Human	Trachea		Not Available	BacDive	34718743
Human	Lung	Sputum	Not Available	Disbiome	25403149
Human	Gingiva	Subgingival plaque	Not Available	Disbiome	27717873
Human	Skin		Not Available	Disbiome	31883828
Human	Large intestine	Feces	Not Available	Disbiome	29041989

Health Effects

Host	Related Health Condition	Microbal response/effect	Data Source	Reference
Human	Chronic rhinitis		BacDive
Human	Pneumonia		BacDive
Human	Sinusitis		BacDive
Human	Cystic fibrosis		BacDive
Human	Chronic obstructive pulmonary disease	Elevated	Disbiome	25403149
Human	Systemic Lupus Erythematosus	Reduced	Disbiome	31883828
Human	Alcoholism	Elevated	Disbiome	29041989
Human	Colorectal cancer	Elevated	Disbiome	31530647
Human	Cystic fibrosis	Elevated	Disbiome	24178246
Human	Obesity	Elevated	Disbiome	31921729
Human	Non-alcoholic fatty liver disease	Elevated	Disbiome	31921729

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024355	L-Tyrosine	Hydrogen Ion	Tyrosine-protein kinase ptk	Phosphorylation	RHEA	34755880
MMDBr0024497	S-Adenosylmethionine	S-Adenosylhomocysteine	Type I restriction enzyme MjaVII methylase subunit	Methylation	RHEA	34755880
MMDBr0024569	alpha-Ketoglutarate	L-Glutamic acid	Aromatic-amino-acid aminotransferase 1	Amine group addition	RHEA	34755880
MMDBr0024572	L-Serine	5'-Deoxyadenosine	Serine-type anaerobic sulfatase-maturating enzyme	Not Available	RHEA	34755880
MMDBr0024636	Phosphate	Ribose-1-phosphate	Probable 6-oxopurine nucleoside phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0024686	Nitrogen	Hydrogen	Nitrogenase iron protein	Nitrogen fixation	RHEA	34755880
MMDBr0024747	NADP(+)	Uridine 5'-monophosphate	Probable tRNA-dihydrouridine synthase	Synthesis	RHEA	34755880
MMDBr0024753	L-Proline	1-Pyrroline-5-carboxylic acid	Proline dehydrogenase 1	Dehydrogenation	RHEA	34755880
MMDBr0024754	Acetic acid	diphosphate	[Citrate [pro-3S]-lyase] ligase	Ligation	RHEA	34755880
MMDBr0024907	Mannitol	L-Histidine	PTS system mannitol-specific EIICB component	Phosphorylation	RHEA	34755880

Genome Data

Genome Link

MMDBm0001066

Genome Length

5410142 bp

# Predicted Proteins

5660

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:49:07 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_016845

MiMeDB ID	Organism	Strain	Serotype	Variant	NCBI Taxonomy	BaSyS2 Genome
MMDBm0000196	Klebsiella pneumoniae subsp. pneumoniae	-	-	-	72407	View
MMDBm0001726	Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044	NTUH-K2044	-	-	484021	View
MMDBm0001727	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	MGH 78578	-	-	272620	View
MMDBm0001728	Klebsiella pneumoniae 342	342	-	-	507522	View
MMDBm0544527	Klebsiella pneumoniae BIDMC 31	BIDMC 31	-	-	1328337	View
MMDBm0544716	Klebsiella pneumoniae MGH 78578	MGH 78578	-	-	1328388	View
MMDBm0544731	Klebsiella pneumoniae subsp. ozaenae	-	-	-	574	View
MMDBm0544802	Klebsiella pneumoniae subsp. rhinoscleromatis	-	-	-	39831	View