MiMeDB: Methanopyrus kandleri AV19 (MMDBm0001838)

Microbe Identification

Microbe name

Methanopyrus kandleri AV19

NCBI Taxonomy ID

190192

Microbe Taxonomy

Superkingdom

Archaea

Kingdom

Archaea

Phylum

Euryarchaeota

Class

Methanopyri

Order

Methanopyrales

Family

Methanopyraceae

Genus

Methanopyrus

Species

kandleri

Strain

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Not Available

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Hyperthermophilic

Habitat

Specialized

Biotic relationship

Free living

Cell arrangement

Not Available

Sporulation

Nonsporulating

Metabolism

Methanogen

Energy source

Lithotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012860	(2R)-2-phosphoglyceric acid	Phosphoenolpyruvic acid	Enolase	Enolization	RHEA	34755880
MMDBr0012876	Deoxyuridine triphosphate	dUMP	Probable deoxyuridine 5'-triphosphate nucleotidohydrolase	Dephosphorylation; Hydrolysis of bond	RHEA	34755880
MMDBr0012883	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012884	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012895	Orotidylic acid	Phosphoribosyl pyrophosphate	Orotate phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0012920	Dihydroneopterin	6-Hydroxymethyl dihydropterin	Folic acid synthesis protein fol1	Aldol addition (or reverse)	RHEA	34755880
MMDBr0012948	(S)-malate(2-)	Oxalacetic acid	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012954	L-Aspartic acid	Argininosuccinic acid	Argininosuccinate synthase	Synthesis	RHEA	34755880
MMDBr0012970	D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Imidazoleglycerol-phosphate dehydratase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0013027	CMP	CDP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013038	N-(5-Phospho-D-ribosyl)anthranilate	Phosphoribosyl pyrophosphate	Tryptophan biosynthesis protein TrpCD	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013040	L-Aspartic acid	Oxalacetic acid	L-aspartate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013041	L-Aspartic acid	Oxalacetic acid	L-aspartate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013127	coenzyme B	coenzyme M-coenzyme B heterodisulfide	Methyl-coenzyme M reductase subunit alpha	Reduction	RHEA	34755880
MMDBr0013128	coenzyme B	coenzyme M-coenzyme B heterodisulfide	Methyl-coenzyme M reductase subunit alpha	Reduction	RHEA	34755880
MMDBr0013164	alpha-Ketoglutarate	(2R)-Homocitric acid	Homocitrate synthase AksA	Synthesis	RHEA	34755880
MMDBr0013165	alpha-Ketoglutarate	(2R)-Homocitric acid	Homocitrate synthase AksA	Synthesis	RHEA	34755880
MMDBr0013184	(S)-2,3,4,5-tetrahydrodipicolinate	N_Acetyl_L_2_amino_6_oxopimelate	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	Acetylation	RHEA	34755880
MMDBr0013194	Porphobilinogen	Hydroxymethylbilane	Porphobilinogen deaminase	Deamination	RHEA	34755880
MMDBr0013221	(R)-2,3-Dihydroxy-3-methylpentanoate	(S)-2-ethyl-2-hydroxy-3-oxobutanoic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0013225	L-Dihydroorotic acid	orotate	Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit	Dehydrogenation	RHEA	34755880
MMDBr0013226	5-Thymidylic acid	dTDP	Putative thymidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013274	L-Homoserine	O-Phosphohomoserine	Homoserine kinase	Phosphorylation	RHEA	34755880
MMDBr0013295	(S)-4-Amino-5-oxopentanoate	5-Aminolevulinic acid	Glutamate-1-semialdehyde 2,1-aminomutase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013309	Phosphoglycolic acid	Glycolic acid	Phosphoglycolate phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0013333	N-Acetylglutamic acid	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013357	(2R)-3-phosphoglyceric acid	(2R)-3-phospho-glyceroyl phosphate	Phosphoglycerate kinase	Phosphorylation	RHEA	34755880
MMDBr0013416	L-Glutamic acid	Ornithine	Arginine biosynthesis bifunctional protein ArgJ	Acetylation; Synthesis	RHEA	34755880
MMDBr0013422	LL-2,6-Diaminoheptanedioate	Meso-2,6-Diaminoheptanedioate	Diaminopimelate epimerase	Epimerization; Racemization	RHEA	34755880
MMDBr0013431	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	Isomerization	RHEA	34755880
MMDBr0013444	D-Ribose-5-phosphate	Phosphoribosyl pyrophosphate	Ribose-phosphate pyrophosphokinase 1	Phosphorylation	RHEA	34755880
MMDBr0013469	Co-sirohydrochlorin	Cobalt	Sirohydrochlorin cobaltochelatase	Chelation	RHEA	34755880
MMDBr0013470	(2R)-2-phosphoglyceric acid	(2R)-3-phosphoglyceric acid	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013473	thiamine phosphate	Thiamine pyrophosphate	Thiamine-monophosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0013489	adenosylcob(III)inamide-GDP	coenzyme B12	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0013547	Uridine triphosphate	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0013655	5-Phosphoribosylamine	N(1)-(5-phospho-beta-D-ribosyl)glycinamide	Phosphoribosylamine--glycine ligase	Ligation	RHEA	34755880
MMDBr0013670	L-Arginine	Agmatine	Pyruvoyl-dependent arginine decarboxylase AaxB	Decarboxylation	RHEA	34755880
MMDBr0013681	Shikimate	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013708	Inosinic acid	Phosphoribosyl pyrophosphate	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of phosphoribosyl group; Synthesis	RHEA	34755880
MMDBr0013717	alpha-Ketoglutarate	L-Glutamic acid	Acetylornithine aminotransferase	Amine group addition	RHEA	34755880
MMDBr0013719	5,6,7,8-Tetrahydromethanopterin	Methanofuran	Formyltransferase/hydrolase complex subunit D	Transfer of a formyl group	RHEA	34755880
MMDBr0013728	(2E,6E,10E)-geranylgeranyl diphosphate	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	Digeranylgeranylglyceryl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0013770	Inosinic acid	Phosphoribosyl formamidocarboxamide	Bifunctional purine biosynthesis protein PurH	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0013773	1-(5-phosphoribosyl)-ATP	Phosphoribosyl pyrophosphate	ATP phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013784	D-Glyceraldehyde 3-phosphate	Dihydroxyacetone phosphate	Bifunctional PGK/TIM	Isomerization	RHEA	34755880
MMDBr0013805	hydrogenselenide	Selenophosphate	Selenide, water dikinase	Phosphorylation	RHEA	34755880
MMDBr0013833	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	N(5)-formyl-5,6,7,8-tetrahydromethanopterin	Methenyltetrahydromethanopterin cyclohydrolase	Hydrolysis	RHEA	34755880
MMDBr0013848	dCTP	dUMP	dCTP deaminase, dUMP-forming	Deamination	RHEA	34755880
MMDBr0013884	L-Aspartic acid	beta-Alanine	L-aspartate decarboxylase dtxS4	Decarboxylation	RHEA	34755880
MMDBr0013886	Carbamoylphosphate	Citrulline	Ornithine carbamoyltransferase	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013908	Guanosine triphosphate	Guanosine diphosphate	GTPase ArgK	Dephosphorylation; Hydrolysis; Nucleic acid synthesis and/or repair	RHEA	34755880
MMDBr0013921	(R)-4'-phosphopantetheine	3'-dephospho-CoA	Phosphopantetheine adenylyltransferase	Dephosphorylation	RHEA	34755880
MMDBr0013946	Carbamoylphosphate	N-carbamoyl-L-aspartate	Protein pyrABCN	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013947	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	5,10-Methylenetetrahydromethanopterin	5,10-methenyltetrahydromethanopterin hydrogenase	Hydrogenation	RHEA	34755880
MMDBr0013948	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	5,10-Methylenetetrahydromethanopterin	5,10-methenyltetrahydromethanopterin hydrogenase	Hydrogenation	RHEA	34755880
MMDBr0013949	5,10-Methylenetetrahydromethanopterin	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	5,10-methenyltetrahydromethanopterin hydrogenase	Hydrogenation	RHEA	34755880
MMDBr0013952	1-(5-phosphoribosyl)-5'-AMP	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	Histidine biosynthesis bifunctional protein HisIE	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0014024	S-Adenosylhomocysteine	S-inosyl-L-homocysteine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014025	S-Adenosylhomocysteine	S-inosyl-L-homocysteine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014061	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Chorismate	Chorismate synthase	Synthesis	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0014083	Shikimate 3-phosphate	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Pentafunctional AROM polypeptide	Synthesis; Dehydration and isomerisation; Oxidation; Phosphorylation; Transfer of a carboxyvinyl group	RHEA	34755880
MMDBr0014102	Sn-Glycerol-1-phosphate	Dihydroxyacetone phosphate	Glycerol-1-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0014103	Sn-Glycerol-1-phosphate	Dihydroxyacetone phosphate	Glycerol-1-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0014105	(S)-malate(2-)	Oxalacetic acid	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014111	alpha-Ketoisovaleric acid	2-Isopropylmalic acid	Isopropyl malate synthase AMT7	Synthesis	RHEA	34755880
MMDBr0014114	N-(5-Phospho-D-ribosyl)anthranilate	1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate	Phosphoribosyl isomerase A	Isomerization	RHEA	34755880
MMDBr0014117	N-Acetyl-L-glutamate 5-semialdehyde	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Reduction	RHEA	34755880
MMDBr0014167	(R)-2,3-Dihydroxy-isovalerate	(2S)-2-acetolactic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0014229	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	(2S)-2-[5-Amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinic acid	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Synthesis	RHEA	34755880
MMDBr0014256	1-(5-phosphoribosyl)-ATP	1-(5-phosphoribosyl)-5'-AMP	Phosphoribosyl-ATP pyrophosphatase	Dephosphorylation; Synthesis	RHEA	34755880
MMDBr0014282	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	5-Aminoimidazole ribonucleotide	Bifunctional purine biosynthetic protein ADE5,7	Ligation	RHEA	34755880
MMDBr0014311	Isopentenyl pyrophosphate	Dimethylallylpyrophosphate	Isopentenyl-diphosphate Delta-isomerase	Isomerization	RHEA	34755880
MMDBr0014327	(2E,6E,10E)-geranylgeranyl diphosphate	sn-3-O-(geranylgeranyl)glycerol 1-phosphate	Geranylgeranylglyceryl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014333	alpha-D-Glucosamine 1-phosphate	D-glucosamine 6-phosphate	Phosphoglucosamine mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0014340	1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	Indole-3-glycerol phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014353	adenosylcob(III)inamide-GDP	adenosylcob(III)alamin 5'-phosphate	Adenosylcobinamide-GDP ribazoletransferase	Transfer of ribazole	RHEA	34755880
MMDBr0014367	Adenine	Hypoxanthine	Adenine deaminase	Deamination	RHEA	34755880
MMDBr0014377	alpha-Ketoglutarate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Histidinol-phosphate aminotransferase	Amine group addition	RHEA	34755880
MMDBr0014407	Argininosuccinic acid	fumarate	Bifunctional protein ArgHA	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014436	L-Glutamic acid	N-Acetylglutamic acid	Amino-acid acetyltransferase	Acetylation; Synthesis	RHEA	34755880
MMDBr0014437	L-Dihydroorotic acid	N-carbamoyl-L-aspartate	Dihydroorotase	Hydrolysis	RHEA	34755880
MMDBr0014447	Uridine 5'-monophosphate	Uridine 5'-diphosphate	UMP-CMP kinase	Phosphorylation	RHEA	34755880
MMDBr0014449	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014450	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014486	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014487	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014491	AICAR	Phosphoribosyl formamidocarboxamide	5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase	Synthesis	RHEA	34755880
MMDBr0017917	5-Aminoimidazole ribonucleotide	4-Amino-2-methyl-5-phosphomethylpyrimidine	Phosphomethylpyrimidine synthase	Synthesis	RHEA	34755880
MMDBr0014504	Cytidine triphosphate	CDP	Riboflavin kinase	Phosphorylation	RHEA	34755880
MMDBr0014505	5'-Methylthioadenosine	S-methyl-5'-thioinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014506	5'-Methylthioadenosine	S-methyl-5'-thioinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014514	dCMP	dCDP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0014556	GMP	Phosphoribosyl pyrophosphate	Hypoxanthine-guanine phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0014574	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol	CDP-archaeol synthase	Synthesis	RHEA	34755880
MMDBr0014591	Guanosine triphosphate	7,8-dihydroneopterin 2',3'-cyclic phosphate	GTP cyclohydrolase MptA	Hydrolysis	RHEA	34755880
MMDBr0014596	Dihydroxyacetone phosphate	Quinolinic acid	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014597	Dihydroxyacetone phosphate	Quinolinic acid	Quinolinate synthase	Synthesis	RHEA	34755880
MMDBr0014601	2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonate	3-Dehydroquinate	3-dehydroquinate synthase	Synthesis	RHEA	34755880
MMDBr0014619	L-3,4-Dihydroxybutan-2-one 4-phosphate	6,7-Dimethyl-8-(1-D-ribityl)lumazine	6,7-dimethyl-8-ribityllumazine synthase	Synthesis	RHEA	34755880
MMDBr0014633	Co-precorrin-5B	Co-precorrin-6A	Cobalt-precorrin-5B C(1)-methyltransferase	Methylation	RHEA	34755880
MMDBr0017926	L-Glutamine	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0014706	2-trans,6-trans,10-trans-Geranylgeranyl diphosphate	tri-trans,hepta-cis-undecaprenyl diphosphate	Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific)	Synthesis	RHEA	34755880
MMDBr0014718	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014719	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014761	6-Carboxy-5,6,7,8-tetrahydropterin	7-Deaza-7-carboxyguanine	7-carboxy-7-deazaguanine synthase	Synthesis	RHEA	34755880
MMDBr0014763	7-Deaza-7-carboxyguanine	7-Cyano-7-carbaguanine	7-cyano-7-deazaguanine synthase	Synthesis	RHEA	34755880
MMDBr0014783	di-trans,octa-cis-undecaprenyl diphosphate	di-trans,octa-cis-undecaprenyl phosphate	Undecaprenyl-diphosphatase BcrC	Dephosphorylation	RHEA	34755880
MMDBr0014813	Inosine triphosphate	IDP	Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014816	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014821	Oxalacetic acid	Hydrogen carbonate	Phosphoenolpyruvate carboxylase	Carboxylation	RHEA	34755880
MMDBr0014829	Xanthosine 5-triphosphate	XDP	Bifunctional phosphopantetheine adenylyltransferase/NTP phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014848	Xanthosine 5-triphosphate	Xanthylic acid	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014909	Inosine triphosphate	Inosinic acid	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014995	Guanosine triphosphate	Guanosine diphosphate	Coenzyme F420:L-glutamate ligase	Ligation	RHEA	34755880
MMDBr0014997	Guanosine triphosphate	Guanosine diphosphate	Coenzyme F420:L-glutamate ligase	Ligation	RHEA	34755880
MMDBr0015003	S-methyl-5'-thioinosine	Hypoxanthine	Probable S-methyl-5'-thioinosine phosphorylase	Phosphorylation	RHEA	34755880
MMDBr0017950	aldehydo-D-ribose 5-phosphate	L-Glutamic acid	Pyridoxal 5'-phosphate synthase subunit PDX1	Synthesis	RHEA	34755880
MMDBr0015120	(6R)-NADHX	(6S)-NADHX	Bifunctional NAD(P)H-hydrate repair enzyme Nnr	Epimerization	RHEA	34755880
MMDBr0015125	(6R)-NADPHX	(6S)-NADPHX	Bifunctional NAD(P)H-hydrate repair enzyme Nnr	Epimerization	RHEA	34755880
MMDBr0015136	3-Isopropylmalate	2-Isopropylmalic acid	3-isopropylmalate dehydratase large subunit gloJ	Isomerization	RHEA	34755880
MMDBr0015316	L-Aspartate-semialdehyde	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate synthase	Synthesis	RHEA	34755880
MMDBr0015402	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015405	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015851	(2R)-2-phosphoglyceric acid	(2R)-2,3-bisphosphoglyceric acid	2-phosphoglycerate kinase	Phosphorylation	RHEA	34755880
MMDBr0015852	(2R)-2,3-bisphosphoglyceric acid	cyclic (2R)-2,3-bisphosphoglyceric acid	Cyclic 2,3-diphosphoglycerate synthetase	Synthesis	RHEA	34755880
MMDBr0015878	5'-Deoxyadenosine	5'-deoxyinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0015879	5'-Deoxyadenosine	5'-deoxyinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0015910	D-Glyceraldehyde 3-phosphate	4-(hydroxymethyl)-2-furancarboxaldehyde phosphate	(5-formylfuran-3-yl)methyl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0016102	Oxoadipic acid	(R)-dihomocitric acid	Homocitrate synthase AksA	Synthesis	RHEA	34755880
MMDBr0016103	Oxoadipic acid	(R)-dihomocitric acid	Homocitrate synthase AksA	Synthesis	RHEA	34755880
MMDBr0016104	2-oxoheptanedioic acid	(R)-trihomocitric acid	Homocitrate synthase AksA	Synthesis	RHEA	34755880
MMDBr0016105	2-oxoheptanedioic acid	(R)-trihomocitric acid	Homocitrate synthase AksA	Synthesis	RHEA	34755880
MMDBr0016121	5,6,7,8-tetrahydrosarcinapterin	5-methyltetrahydrosarcinapterin	Acetyl-CoA decarbonylase/synthase complex subunit gamma	Synthesis	RHEA	34755880
MMDBr0016125	cobalt(+)	Carbon monoxide	Acetyl-CoA decarbonylase/synthase complex subunit beta	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0017977	5,10-Methylenetetrahydromethanopterin	5,6,7,8-Tetrahydromethanopterin	Serine hydroxymethyltransferase	Methylation	RHEA	34755880
MMDBr0016462	(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate	Cyclic pyranopterin monophosphate	Cyclic pyranopterin monophosphate synthase	Synthesis	RHEA	34755880
MMDBr0016547	archaetidylserine	archaetidylethanolamine	Putative archaetidylserine decarboxylase proenzyme	Decarboxylation	RHEA	34755880
MMDBr0016628	Ni-sirohydrochlorin	Nickel	Sirohydrochlorin cobaltochelatase	Chelation	RHEA	34755880
MMDBr0016659	5-Methyl-5,6,7,8-tetrahydromethanopterin	5,6,7,8-Tetrahydromethanopterin	Tetrahydromethanopterin S-methyltransferase subunit A	Methylation	RHEA	34755880
MMDBr0017987	5-amino-6-(D-ribitylamino)uracil	2-iminoacetate	5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase	Synthesis	RHEA	34755880
MMDBr0017988	5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil	5'-Deoxyadenosine	7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase	Synthesis	RHEA	34755880
MMDBr0017022	S-inosyl-L-homocysteine	Inosine	S-inosyl-L-homocysteine hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0017023	S-inosyl-L-homocysteine	Inosine	S-inosyl-L-homocysteine hydrolase	Hydrolysis of bond	RHEA	34755880
MMDBr0017101	3'-dephospho-CoA	Guanosine diphosphate	GTP-dependent dephospho-CoA kinase	Phosphorylation	RHEA	34755880
MMDBr0017356	(2S)-2-phospholactic acid	(2S)-lactyl-2-diphospho-5'-guanosine	2-phospho-L-lactate guanylyltransferase	Transfer of a GMP	RHEA	34755880
MMDBr0017362	(2S)-lactyl-2-diphospho-5'-guanosine	GMP	2-phospho-L-lactate transferase	Transfer of the 2-phospholactate moiety	RHEA	34755880
MMDBr0017834	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate	D-Glyceraldehyde 3-phosphate	Tryptophan synthase	Synthesis	RHEA	34755880
MMDBr0017843	L-Glutamine	GMP	GMP synthase [glutamine-hydrolyzing]	Synthesis	RHEA	34755880
MMDBr0017851	Fructose 6-phosphate	D-glucosamine 6-phosphate	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	Amine group addition	RHEA	34755880
MMDBr0017863	L-Tyrosine	Tyramine	Probable L-tyrosine/L-aspartate decarboxylase	Carboxylation	RHEA	34755880
MMDBr0017874	L-Glutamine	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017879	L-Glutamine	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	Phosphoribosylformylglycinamidine synthase	Synthesis	RHEA	34755880
MMDBr0017882	Hydrogen carbonate	Carbamoylphosphate	Carbamoyl-phosphate synthase small chain	Synthesis	RHEA	34755880
MMDBr0017894	L-Histidinol	L-Histidine	Histidinol dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0017897	L-Methionine	S-Adenosylmethionine	S-adenosylmethionine synthase	Synthesis	RHEA	34755880
MMDBr0017916	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	AICAR	Imidazole glycerol phosphate synthase subunit HisH	Synthesis	RHEA	34755880
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024360	L-Valine	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024389	L-Leucine	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024418	L-Alanine	diphosphate	Alanine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024424	S-Adenosylmethionine	S-Adenosylhomocysteine	Protein-L-isoaspartate O-methyltransferase	Methylation	RHEA	34755880
MMDBr0024449	L-Methionine	diphosphate	Methionine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024474	L-Proline	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024477	Cytidine triphosphate	diphosphate	CCA-adding enzyme	Synthesis and repair of 3'-terminal CCA sequence of tRNA	RHEA	34755880
MMDBr0024483	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024522	Glycine	diphosphate	Glycine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024542	5,10-Methylenetetrahydromethanopterin	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	F420-dependent methylenetetrahydromethanopterin dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0024559	Adenosine triphosphate	Hydrogen Ion	Histidine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024568	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024590	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0024597	L-Aspartic acid	diphosphate	Aspartate--tRNA(Asp/Asn) ligase	Ligation	RHEA	34755880
MMDBr0024628	L-Phenylalanine	Hydrogen Ion	Phenylalanine--tRNA ligase beta subunit	Ligation	RHEA	34755880
MMDBr0024639	di-mu-Sulfido-diiron(2+)	di-mu-Sulfido-diiron(1+)	Molybdenum-containing formylmethanofuran dehydrogenase 1 subunit C	Dehydrogenation	RHEA	34755880
MMDBr0024656	L-Arginine	diphosphate	Arginine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024666	L-Lysine	diphosphate	Lysine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024671	Carbon monoxide	di-mu-Sulfido-diiron(1+)	Acetyl-CoA decarbonylase/synthase complex subunit alpha	Dehydrogenation; Synthesis	RHEA	34755880
MMDBr0024674	5-Methyl-5,6,7,8-tetrahydromethanopterin	5,10-Methylenetetrahydromethanopterin	5,10-methylenetetrahydromethanopterin reductase	Reduction	RHEA	34755880
MMDBr0024745	L-Glutamic acid	diphosphate	Glutamate--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024759	Adenosine triphosphate	diphosphate	RNA 3'-terminal phosphate cyclase	Cycle formation	RHEA	34755880
MMDBr0024763	L-Tryptophan	Hydrogen Ion	Tryptophan--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024787	L-Threonine	Hydrogen Ion	Threonine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024791	Adenosine triphosphate	ADP	L-seryl-tRNA(Sec) kinase	Phosphorylation	RHEA	34755880
MMDBr0024792	Selenophosphate	Phosphate	O-phosphoseryl-tRNA(Sec) selenium transferase	Transfer of O-phosphoseryl-tRNA(Sec) selenium	RHEA	34755880
MMDBr0024797	Phosphoserine	diphosphate	O-phosphoserine--tRNA(Cys) ligase	Ligation	RHEA	34755880
MMDBr0024798	Hydrogen sulfide	Phosphate	O-phospho-L-seryl-tRNA:Cys-tRNA synthase	Synthesis	RHEA	34755880
MMDBr0024905	Spermidine	1,3-Diaminopropane	Probable deoxyhypusine synthase	Synthesis	RHEA	34755880
MMDBr0024956	S-Adenosylmethionine	S-Adenosylhomocysteine	Diphthine synthase	Synthesis	RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase	Synthesis	RHEA	34755880
MMDBr0025060	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0025114	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (cytidine(56)-2'-O)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025124	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine(26)-N(2))-dimethyltransferase	Methylation	RHEA	34755880
MMDBr0025130	7-Cyano-7-carbaguanine	Guanine	tRNA-guanine(15) transglycosylase	Glycosidic bond hydrolysis	RHEA	34755880
MMDBr0025151	Agmatine	Hydrogen Ion	tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS	Synthesis	RHEA	34755880
MMDBr0025154	Water	Niacinamide	NAD-dependent protein deacetylase	Deacetylation	RHEA	34755880
MMDBr0025173	Water	Hydrogen Ion	tRNA(Met) cytidine acetyltransferase TmcA	N-Acetylation	RHEA	34755880
MMDBr0025193	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0025273	Water	Niacinamide	NAD-dependent protein deacylase	Deacylation	RHEA	34755880
MMDBr0025326	Guanosine triphosphate	5'-Deoxyadenosine	Probable GTP 3',8-cyclase	Cycle formation	RHEA	34755880
MMDBr0025563	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (pseudouridine(54)-N(1))-methyltransferase	Methylation	RHEA	34755880
MMDBr0025803	S-Adenosylmethionine	5'-Methylthioadenosine	16S rRNA aminocarboxypropyltransferase	Transfer of an aminocarboxypropyl group	RHEA	34755880
MMDBr0025844	2,3-bis-O-(phytanyl)-sn-glycerol 1-phosphate	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0025845	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	2,3-bis-O-(phytanyl)-sn-glycerol 1-phosphate	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0025986	Guanosine triphosphate	GMP	RNA-splicing ligase RtcB	Ligation	RHEA	34755880
MMDBr0026022	Adenosine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026023	Cytidine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026024	Uridine 5'-monophosphate	Uridine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026025	Guanosine monophosphate	Guanosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026046	Uridine 5'-diphosphate	Uridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026047	Uridine 5'-diphosphate	Cytidine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026048	Guanosine 3',5'-bis(diphosphate)	Guanosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026061	Cytidine triphosphate	Uridine 5'-diphosphate	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026062	Uridine triphosphate	Uridine 5'-diphosphate	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026063	Adenosine triphosphate	Adenosine diphosphate	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026064	Guanosine triphosphate	Guanosine 3',5'-bis(diphosphate)	Nucleoside-triphosphatase THEP1	Dephosphorylation	RHEA	34755880
MMDBr0026085	Deoxyuridine-5'-diphosphate	Deoxyuridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026086	2'-Deoxycytidine 5'-diphosphate	Deoxycytidine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026087	2'-Deoxyadenosine 5'-diphosphate	Deoxyadenosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026088	2'-Deoxyguanosine 5'-diphosphate	2'-Deoxyguanosine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880

Genome Data

Genome Link

Not Available

Genome Length

Not Available

# Predicted Proteins

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

Reference

PMID: 17704766

Source Links

GenBank