MiMeDB: Methanosphaera stadtmanae DSM 3091 (MMDBm0001846)

Microbe Identification

Microbe name

Methanosphaera stadtmanae DSM 3091

NCBI Taxonomy ID

339860

Microbe Taxonomy

Superkingdom

Archaea

Kingdom

Not Available

Phylum

Euryarchaeota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanosphaera

Species

stadtmanae

Strain

Microbe Properties

Gram staining properties

Positive

Shape

Cocci

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

HostAssociated

Biotic relationship

Free living

Cell arrangement

Pairs - Tetrads

Sporulation

Not Available

Metabolism

Methanol reducer - Methanogen

Energy source

Lithotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0007226	(R)-2,3-Dihydroxy-3-methylpentanoate	(R)-3-Hydroxy-3-methyl-2-oxopentanoate		Not Available	VMH	30371894
MMDBr0006985	LL-2,6-Diaminoheptanedioate	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0006988	Meso-2,6-Diaminoheptanedioate	Meso-2,6-Diaminoheptanedioate		Not Available	VMH	30371894
MMDBr0006997	2-Ketobutyric acid	2-Ketobutyric acid		Not Available	VMH	30371894
MMDBr0007038	3-Carboxy-3-hydroxy-4-methylpentanoate	alpha-Ketoisovaleric acid		Not Available	VMH	30371894
MMDBr0008045	4-Hydroxybenzoic acid	4-Hydroxybenzoic acid		Not Available	VMH	30371894
MMDBr0007683	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	5-Aminoimidazole ribonucleotide		Not Available	VMH	30371894
MMDBr0008117	Acetoacetic acid	Acetoacetyl-CoA		Not Available	VMH	30371894
MMDBr0008079	Acetaldehyde	Acetaldehyde		Not Available	VMH	30371894
MMDBr0006891	Adenosyl cobinamide phosphate	Adenosine-GDP-cobinamide		Not Available	VMH	30371894
MMDBr0007239	Propionic acid	Propionyl-CoA		Not Available	VMH	30371894
MMDBr0007042	N-Acetylglutamic acid	N-Acetyl-L-glutamyl 5-phosphate		Not Available	VMH	30371894
MMDBr0007043	L-Glutamic acid	N-Acetylglutamic acid		Not Available	VMH	30371894
MMDBr0008261	N2-Acetylornithine	N-Acetyl-L-citrulline		Not Available	VMH	30371894
MMDBr0007044	N2-Acetylornithine	N-Acetyl-L-glutamate 5-semialdehyde		Not Available	VMH	30371894
MMDBr0000209	Acetic acid	Acetic acid		Not Available	VMH	9651205
MMDBr0008431	Adenosyl cobyrinate a,c diamide	Adenosyl cobinamide		Not Available	VMH	30371894
MMDBr0006898	Adenosyl cobyrinate a,c diamide	Adenosyl cobinamide		Not Available	VMH	30371894
MMDBr0006899	Adenosyl cobyrinate a,c diamide	Adenosyl cobinamide phosphate		Not Available	VMH	30371894
MMDBr0007244	Chorismate	4-Amino-4-deoxychorismate		Not Available	VMH	30371894
MMDBr0006900	Adenosyl cobyrinate diamide	Adenosyl cobyrinate a,c diamide		Not Available	VMH	30371894
MMDBr0008086	Adenine	Hypoxanthine		Not Available	VMH	30371894
MMDBr0006992	Adenine	Adenine		Not Available	VMH	30371894
MMDBr0007247	Adenosine	Adenosine		Not Available	VMH	30371894
MMDBr0000223	Adenosine triphosphate	Cyclic AMP		Not Available	VMH	10481931; 11299302; 11423534; 11840511; 12503609; 12609998; 12623444; 1427768; 14996950; 15547246; 7860067; 7959689; 8076676
MMDBr0006902	Adenosyl cobinamide	Adenosyl cobinamide phosphate		Not Available	VMH	30371894
MMDBr0007653	Adenosine diphosphate ribose	D-Ribose-5-phosphate		Not Available	VMH	30371894
MMDBr0007249	Adenylsuccinic acid	Fumaric acid		Not Available	VMH	30371894
MMDBr0007250	SAICAR	AICAR		Not Available	VMH	30371894
MMDBr0007251	L-Aspartic acid	Adenylsuccinic acid		Not Available	VMH	30371894
MMDBr0007252	ADP-D-Glycero-D-manno-heptose	ADP-L-Glycero-D-manno-heptose		Not Available	VMH	30371894
MMDBr0007704	Agmatine	Putrescine		Not Available	VMH	30371894
MMDBr0007047	N-Acetyl-L-glutamate 5-semialdehyde	N-Acetyl-L-glutamyl 5-phosphate		Not Available	VMH	30371894
MMDBr0008137	S-Adenosylhomocysteine	Adenosine		Not Available	VMH	30371894
MMDBr0007223	S-Adenosylhomocysteine	Adenine		Not Available	VMH	30371894
MMDBr0008065	5-Aminoimidazole ribonucleotide	4-Amino-5-hydroxymethyl-2-methylpyrimidine		Not Available	VMH	30371894
MMDBr0007048	O-Acetyl-L-homoserine	Acetic acid		Not Available	VMH	30371894
MMDBr0007706	10-Formyltetrahydrofolic acid	Phosphoribosyl formamidocarboxamide		Not Available	VMH	30371894
MMDBr0007707	5-Aminoimidazole ribonucleotide	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate		Not Available	VMH	30371894
MMDBr0008438	Succinyl-CoA	Oxoglutaric acid		Not Available	VMH	30371894
MMDBr0007253	D-Alanine	D-Alanyl-D-alanine		Not Available	VMH	30371894
MMDBr0007254	L-Alanyl-L-Glutamate	L-Alanine		Not Available	VMH	30371894
MMDBr0007255	L-Alanyl-L-Glutamate	L-Alanyl-L-Glutamate		Not Available	VMH	30371894
MMDBr0007256	Carnosine	L-Alanine		Not Available	VMH	30371894
MMDBr0007257	Carnosine	Carnosine		Not Available	VMH	30371894
MMDBr0007258	L-Alanine	D-Alanine		Not Available	VMH	30371894
MMDBr0007627	L-Alanine	L-Alanine		Not Available	VMH	30371894
MMDBr0008294	Ethanol	Acetaldehyde		Not Available	VMH	30371894
MMDBr0008520	2-Demethylmenaquinone 8	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0007262	Cysteinylglycine	L-Cysteine		Not Available	VMH	30371894
MMDBr0007263	2-Aminobenzoic acid	N-(5-Phospho-D-ribosyl)anthranilate		Not Available	VMH	30371894
MMDBr0007264	Chorismate	2-Aminobenzoic acid		Not Available	VMH	30371894
MMDBr0007265	Chorismate	2-Aminobenzoic acid		Not Available	VMH	30371894
MMDBr0007266	L-2-Amino-3-oxobutanoic acid	Aminoacetone		Not Available	VMH	30371894
MMDBr0008276	D-Arabinose	D-Arabinose		Not Available	VMH	30371894
MMDBr0007722	Argininosuccinic acid	L-Arginine		Not Available	VMH	30371894
MMDBr0007051	L-Aspartic acid	Argininosuccinic acid		Not Available	VMH	30371894
MMDBr0000342	L-Aspartic acid	L-Asparagine		Not Available	VMH	2564390; 2886907
MMDBr0007270	L-Asparagine	L-Asparagine		Not Available	VMH	30371894
MMDBr0007272	L-Aspartic acid	Ureidosuccinic acid		Not Available	VMH	30371894
MMDBr0007178	L-Aspartic acid	Iminoaspartate		Not Available	VMH	30371894
MMDBr0007274	Oxoglutaric acid	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007275	L-Aspartic acid	L-Aspartic acid		Not Available	VMH	30371894
MMDBr0007052	Phosphoribosyl pyrophosphate	1-(5-phosphoribosyl)-ATP		Not Available	VMH	30371894
MMDBr0007277	Biotinyl-5'-AMP	Biotin		Not Available	VMH	30371894
MMDBr0008067	Biotin	Biotin		Not Available	VMH	30371894
MMDBr0006908	Calcium	Calcium		Not Available	VMH	30371894
MMDBr0006909	Cobinamide	Adenosyl cobinamide		Not Available	VMH	30371894
MMDBr0007282	L-Glutamine	Carbamoylphosphate		Not Available	VMH	30371894
MMDBr0007283	Cadmium	Cadmium		Not Available	VMH	30371894
MMDBr0007284	CMP-3-Deoxy-D-manno-octulosonate	Cytidine monophosphate		Not Available	VMH	30371894
MMDBr0007285	Cysteinylglycine	Cysteinylglycine		Not Available	VMH	30371894
MMDBr0008459	Methane	Methane		Not Available	VMH	30371894
MMDBr0007738	Chorismate	Prephenate		Not Available	VMH	30371894
MMDBr0007286	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Chorismate		Not Available	VMH	30371894
MMDBr0007288	Cobalt	Cobalt		Not Available	VMH	30371894
MMDBr0006912	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006913	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006914	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006915	S-Adenosylmethionine	Acetaldehyde		Not Available	VMH	30371894
MMDBr0006916	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006917	Cobalt-precorrin 6	Cobalt-dihydro-precorrin 6		Not Available	VMH	30371894
MMDBr0006918	Cobalt-precorrin 8	Cobyrinate		Not Available	VMH	30371894
MMDBr0006994	Cytosine	Cytosine		Not Available	VMH	30371894
MMDBr0007290	Uridine triphosphate	Cytidine triphosphate		Not Available	VMH	30371894
MMDBr0007291	L-Glutamine	Cytidine triphosphate		Not Available	VMH	30371894
MMDBr0006920	Cobyrinate	Cob(II)yrinate a,c diamide		Not Available	VMH	30371894
MMDBr0006921	O-Acetyl-L-serine	Acetic acid		Not Available	VMH	30371894
MMDBr0007293	L-Cystathionine	2-Ketobutyric acid		Not Available	VMH	30371894
MMDBr0007294	Homocysteine	L-Cystathionine		Not Available	VMH	30371894
MMDBr0007625	L-Cysteine	L-Cysteine		Not Available	VMH	30371894
MMDBr0006922	Cytidine	Cytidine monophosphate		Not Available	VMH	30371894
MMDBr0007744	Cytidine monophosphate	CDP		Not Available	VMH	30371894
MMDBr0007745	dCMP	dCDP		Not Available	VMH	30371894
MMDBr0007296	Copper	Copper		Not Available	VMH	30371894
MMDBr0007297	Copper	Copper		Not Available	VMH	30371894
MMDBr0007298	Deoxyadenosine	Deoxyadenosine		Not Available	VMH	30371894
MMDBr0007299	Meso-2,6-Diaminoheptanedioate	L-Lysine		Not Available	VMH	30371894
MMDBr0007300	LL-2,6-Diaminoheptanedioate	Meso-2,6-Diaminoheptanedioate		Not Available	VMH	30371894
MMDBr0007302	dCTP	Deoxyuridine triphosphate		Not Available	VMH	30371894
MMDBr0007303	Cytidine triphosphate	Uridine triphosphate		Not Available	VMH	30371894
MMDBr0008420	Dodecanoic acid	Dodecanoic acid		Not Available	VMH	30371894
MMDBr0007747	(R)-2,3-Dihydroxy-3-methylbutanoate	alpha-Ketoisovaleric acid		Not Available	VMH	30371894
MMDBr0007748	(R)-2,3-Dihydroxy-3-methylpentanoate	3-Methyl-2-oxovaleric acid		Not Available	VMH	30371894
MMDBr0007307	2,3-Dihydrodipicolinate	2,3,4,5-Tetrahydrodipicolinate		Not Available	VMH	30371894
MMDBr0007311	4,5-Dihydroorotic acid	Menaquinol 8		Not Available	VMH	30371894
MMDBr0007657	4,5-Dihydroorotic acid	Orotic acid		Not Available	VMH	30371894
MMDBr0007312	4,5-Dihydroorotic acid	Hydrogen peroxide		Not Available	VMH	30371894
MMDBr0007313	4,5-Dihydroorotic acid	Ureidosuccinic acid		Not Available	VMH	30371894
MMDBr0007316	Dimethylallylpyrophosphate	Geranyl-PP		Not Available	VMH	30371894
MMDBr0007317	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate	Dimethylallylpyrophosphate		Not Available	VMH	30371894
MMDBr0006998	2-Octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0007322	2-Dehydropantoate	(R)-Pantoate		Not Available	VMH	30371894
MMDBr0007323	5-Thymidylic acid	dTDP		Not Available	VMH	30371894
MMDBr0007326	Glyceraldehyde 3-phosphate	1-Deoxy-D-xylulose 5-phosphate		Not Available	VMH	30371894
MMDBr0007328	Oxoglutaric acid	4-Hydroxy-2-oxoglutaric acid		Not Available	VMH	30371894
MMDBr0007329	2-Phospho-D-glyceric acid	Phosphoenolpyruvic acid		Not Available	VMH	30371894
MMDBr0008457	Ethanol	Ethanol		Not Available	VMH	30371894
MMDBr0007802	Myristic acid	Tetradecanoyl-CoA		Not Available	VMH	30371894
MMDBr0007803	Palmitic acid	Palmityl-CoA		Not Available	VMH	30371894
MMDBr0007804	Palmitoleic acid	Palmitoleyl-CoA		Not Available	VMH	30371894
MMDBr0007805	Stearic acid	Stearoyl-CoA		Not Available	VMH	30371894
MMDBr0007806	Oleic acid	oleoyl-CoA		Not Available	VMH	30371894
MMDBr0007396	Fructose 1,6-bisphosphate	Dihydroxyacetone phosphate		Not Available	VMH	30371894
MMDBr0007399	Fructose 1,6-bisphosphate	Fructose 6-phosphate		Not Available	VMH	30371894
MMDBr0001211	Formic acid	Carbon dioxide		Not Available	VMH	30371894
MMDBr0008413	Tetrahydrofolic acid	Folic acid		Not Available	VMH	30371894
MMDBr0008304	Folic acid	Folic acid		Not Available	VMH	30371894
MMDBr0007811	Formic acid	Formic acid		Not Available	VMH	30371894
MMDBr0007407	Fumaric acid	MK-8		Not Available	VMH	30371894
MMDBr0007408	2-Demethylmenaquinol 8	2-Demethylmenaquinone 8		Not Available	VMH	30371894
MMDBr0007409	Farnesyl pyrophosphate	2-trans,6-trans,10-trans-Geranylgeranyl diphosphate		Not Available	VMH	30371894
MMDBr0007410	Farnesyl pyrophosphate	Trans,Trans,Cis-Geranylgeranyl Diphosphate		Not Available	VMH	30371894
MMDBr0008072	Formic acid	10-Formyltetrahydrofolic acid		Not Available	VMH	30371894
MMDBr0007412	Fumaric acid	(S)-malate(2-)		Not Available	VMH	30371894
MMDBr0007413	D-Glucosamine 1-phosphate	N-Acetyl-glucosamine 1-phosphate		Not Available	VMH	30371894
MMDBr0007815	Thymidine 5'-triphosphate	dTDP-D-Glucose		Not Available	VMH	30371894
MMDBr0007416	L-Glutamic-gamma-semialdehyde	L-D-1-Pyrroline-5-carboxylic acid		Not Available	VMH	30371894
MMDBr0007421	Glucose 1-phosphate	Uridine diphosphate glucose		Not Available	VMH	30371894
MMDBr0007423	Glyceraldehyde 3-phosphate	Glyceric acid 1,3-biphosphate		Not Available	VMH	30371894
MMDBr0008325	Glyceraldehyde 3-phosphate	Glyceric acid 1,3-biphosphate		Not Available	VMH	30371894
MMDBr0006939	10-Formyltetrahydrofolic acid	5'-Phosphoribosyl-N-formylglycineamide		Not Available	VMH	30371894
MMDBr0012622	Chenodeoxycholic acid glycine conjugate	Chenodeoxycholic acid		Not Available	VMH	30371894
MMDBr0012623	Glycocholic acid	Cholic acid		Not Available	VMH	30371894
MMDBr0007424	Fructose 6-phosphate	Glucosamine 6-phosphate		Not Available	VMH	30371894
MMDBr0007425	Cysteinylglycine	Glutathione		Not Available	VMH	30371894
MMDBr0007427	L-Serine	Glycine		Not Available	VMH	30371894
MMDBr0007429	Deoxyadenosine triphosphate	Guanosine diphosphate		Not Available	VMH	30371894
MMDBr0007430	L-Glutamic acid	L-Glutamine		Not Available	VMH	30371894
MMDBr0007066	L-Glutamine	L-Glutamine		Not Available	VMH	30371894
MMDBr0001335	L-Cysteine	gamma-Glutamylcysteine		Not Available	VMH	30371894
MMDBr0006942	L-Glutamic acid	Oxoglutaric acid		Not Available	VMH	30371894
MMDBr0007431	L-Glutamic acid	Oxoglutaric acid		Not Available	VMH	30371894
MMDBr0007068	L-Glutamic acid	Oxoglutaric acid		Not Available	VMH	30371894
MMDBr0007833	L-Glutamine	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007432	D-Glutamate	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0008461	Oxoglutaric acid	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0008462	Oxoglutaric acid	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007835	L-Glutamic acid	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007434	Glycyl-L-asparagine	L-Asparagine		Not Available	VMH	30371894
MMDBr0007435	Glycyl-L-asparagine	Glycyl-L-asparagine		Not Available	VMH	30371894
MMDBr0007436	Glycyl-L-aspartate	L-Aspartic acid		Not Available	VMH	30371894
MMDBr0007437	Glycyl-L-aspartate	Glycyl-L-aspartate		Not Available	VMH	30371894
MMDBr0007842	Glycerol	Glycerol		Not Available	VMH	30371894
MMDBr0007438	Glycyl-L-glutamine	L-Glutamine		Not Available	VMH	30371894
MMDBr0007439	Glycyl-L-glutamine	Glycyl-L-glutamine		Not Available	VMH	30371894
MMDBr0007440	Glycyl-L-glutamate	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007441	Glycyl-L-glutamate	Glycyl-L-glutamate		Not Available	VMH	30371894
MMDBr0007843	Glycerol	Glycerol 3-phosphate		Not Available	VMH	30371894
MMDBr0007442	Glycylleucine	Glycine		Not Available	VMH	30371894
MMDBr0007443	Glycylleucine	Glycylleucine		Not Available	VMH	30371894
MMDBr0007444	Glycyl-L-methionine	Glycine		Not Available	VMH	30371894
MMDBr0007445	Glycyl-L-methionine	Glycyl-L-methionine		Not Available	VMH	30371894
MMDBr0007446	Glycyl-Phenylalanine	Glycine		Not Available	VMH	30371894
MMDBr0007447	Glycyl-Phenylalanine	Glycyl-Phenylalanine		Not Available	VMH	30371894
MMDBr0007448	Glycylproline	Glycine		Not Available	VMH	30371894
MMDBr0007449	Glycylproline	Glycylproline		Not Available	VMH	30371894
MMDBr0007450	Glycyl-L-tyrosine	Glycine		Not Available	VMH	30371894
MMDBr0007451	Glycyl-L-tyrosine	Glycyl-L-tyrosine		Not Available	VMH	30371894
MMDBr0007623	Glycine	Glycine		Not Available	VMH	30371894
MMDBr0007453	D-Glycero-D-manno-heptose 1-phosphate	ADP-D-Glycero-D-manno-heptose		Not Available	VMH	30371894
MMDBr0007454	D-Glycero-D-manno-heptose 7-phosphate	D-Glycero-D-manno-heptose 1,7-bisphosphate		Not Available	VMH	30371894
MMDBr0007455	D-Glycero-D-manno-heptose 1,7-bisphosphate	D-Glycero-D-manno-heptose 1-phosphate		Not Available	VMH	30371894
MMDBr0007457	L-Glutamine	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007458	Geranyl-PP	Farnesyl pyrophosphate		Not Available	VMH	30371894
MMDBr0007849	Guanosine	Guanosine monophosphate		Not Available	VMH	30371894
MMDBr0005655	Guanosine	Guanosine		Not Available	VMH	30371894
MMDBr0007459	Guanosine triphosphate	Dihydroneopterin triphosphate		Not Available	VMH	30371894
MMDBr0008029	Hydrogen	Hydrogen		Not Available	VMH	30371894
MMDBr0007854	Acetoacetyl-CoA	3-Hydroxybutyryl-CoA		Not Available	VMH	30371894
MMDBr0007855	3-Oxooctanoyl-CoA	(S)-3-Hydroxyoctanoyl-CoA		Not Available	VMH	30371894
MMDBr0007856	3-Oxodecanoyl-CoA	(S)-Hydroxydecanoyl-CoA		Not Available	VMH	30371894
MMDBr0007857	3-Oxododecanoyl-CoA	(S)-3-Hydroxydodecanoyl-CoA		Not Available	VMH	30371894
MMDBr0007858	3-Oxotetradecanoyl-CoA	(S)-3-Hydroxytetradecanoyl-CoA		Not Available	VMH	30371894
MMDBr0007859	3-Oxohexadecanoyl-CoA	(S)-3-Hydroxyhexadecanoyl-CoA		Not Available	VMH	30371894
MMDBr0007860	2-Methyl-3-hydroxybutyryl-CoA	2-Methylacetoacetyl-CoA		Not Available	VMH	30371894
MMDBr0007861	(3S)-3-Hydroxyadipyl-CoA	3-Oxoadipyl-CoA		Not Available	VMH	30371894
MMDBr0008460	Hydrogen carbonate	Hydrogen carbonate		Not Available	VMH	30371894
MMDBr0006946	Heme	Heme		Not Available	VMH	30371894
MMDBr0006947	Heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA	Phospho-heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA		Not Available	VMH	30371894
MMDBr0006948	ADP-L-Glycero-D-manno-heptose	Heptosyl-phospho-heptosyl-heptosyl-kdo2-lipidA		Not Available	VMH	30371894
MMDBr0007463	4-Methyl-5-(2-hydroxyethyl)-thiazole	4-Methyl-5-(2-phosphoethyl)-thiazole		Not Available	VMH	30371894
MMDBr0007866	(S)-3-Hydroxyisobutyric acid	2-Methyl-3-oxopropanoic acid		Not Available	VMH	30371894
MMDBr0007070	L-Histidinol	L-Histidine		Not Available	VMH	30371894
MMDBr0010852	L-Histidinol	L-Histidinal		Not Available	VMH	30371894
MMDBr0010853	L-Histidinal	L-Histidine		Not Available	VMH	30371894
MMDBr0007629	L-Histidine	L-Histidine		Not Available	VMH	30371894
MMDBr0007465	Porphobilinogen	Hydroxymethylbilane		Not Available	VMH	30371894
MMDBr0008103	3-Hydroxy-3-methylglutaryl-CoA	Acetoacetyl-CoA		Not Available	VMH	30371894
MMDBr0007466	4-Amino-5-hydroxymethyl-2-methylpyrimidine	4-Amino-2-methyl-5-phosphomethylpyrimidine		Not Available	VMH	30371894
MMDBr0008326	L-Homoserine	O-Acetyl-L-homoserine		Not Available	VMH	30371894
MMDBr0007467	L-Homoserine	O-Phosphohomoserine		Not Available	VMH	30371894
MMDBr0007871	Hypoxanthine	Inosinic acid		Not Available	VMH	30371894
MMDBr0007072	D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate	3-(Imidazol-4-yl)-2-oxopropyl phosphate		Not Available	VMH	30371894
MMDBr0007468	Oxoglutaric acid	3-Methyl-2-oxovaleric acid		Not Available	VMH	30371894
MMDBr0007879	Inosinic acid	Phosphoribosyl formamidocarboxamide		Not Available	VMH	30371894
MMDBr0007470	Inosinic acid	Xanthylic acid		Not Available	VMH	30371894
MMDBr0005490	Inosine	Inosinic acid		Not Available	VMH	30371894
MMDBr0005492	Isopentenyl pyrophosphate	Dimethylallylpyrophosphate		Not Available	VMH	30371894
MMDBr0007196	Isopentenyl pyrophosphate	Undecaprenyl diphosphate		Not Available	VMH	30371894
MMDBr0007074	3-Carboxy-2-hydroxy-4-methylpentanoate	3-Carboxy-4-methyl-2-oxopentanoate		Not Available	VMH	30371894
MMDBr0007075	3-Carboxy-2-hydroxy-4-methylpentanoate	2-Isopropylmaleate		Not Available	VMH	30371894
MMDBr0007076	2-Isopropylmaleate	3-Carboxy-3-hydroxy-4-methylpentanoate		Not Available	VMH	30371894
MMDBr0007474	(R)-2,3-Dihydroxy-3-methylbutanoate	(S)-2-Acetolactate		Not Available	VMH	30371894
MMDBr0007197	Potassium	Potassium		Not Available	VMH	30371894
MMDBr0008524	Potassium	Potassium		Not Available	VMH	30371894
MMDBr0007883	L-Arogenate	L-Aspartic acid		Not Available	VMH	30371894
MMDBr0007476	Oxoglutaric acid	Ketoleucine		Not Available	VMH	30371894
MMDBr0007477	L-Leucine	L-Leucine		Not Available	VMH	30371894
MMDBr0007479	L-Lysine	L-Lysine		Not Available	VMH	30371894
MMDBr0007119	L-Arogenate	L-Tyrosine		Not Available	VMH	30371894
MMDBr0008287	L-Aspartic acid	Iminoaspartate		Not Available	VMH	30371894
MMDBr0008361	Guanosine triphosphate	Guanosine diphosphate mannose		Not Available	VMH	30371894
MMDBr0008463	Mesna	Methyl Coenzyme M		Not Available	VMH	30371894
MMDBr0007900	(S)-malate(2-)	Oxalacetic acid		Not Available	VMH	30371894
MMDBr0007485	2-C-Methyl-D-erythritol 2,4-cyclodiphosphate	1-Hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate		Not Available	VMH	30371894
MMDBr0001638	Methanol	Methanol		Not Available	VMH	30371894
MMDBr0007486	L-methionyl-L-alanine	L-Alanine		Not Available	VMH	30371894
MMDBr0007487	L-methionyl-L-alanine	L-methionyl-L-alanine		Not Available	VMH	30371894
MMDBr0001644	L-Methionine	S-Adenosylmethionine		Not Available	VMH	30371894
MMDBr0006953	5-Methyltetrahydrofolic acid	L-Methionine		Not Available	VMH	30371894
MMDBr0008074	L-Methionine	L-Methionine		Not Available	VMH	30371894
MMDBr0005499	Mevalonic acid	Mevalonic acid-5P		Not Available	VMH	30371894
MMDBr0007490	Magnesium	Magnesium		Not Available	VMH	30371894
MMDBr0008455	Mesna	5,6,7,8-Tetrahydromethanopterin		Not Available	VMH	30371894
MMDBr0008266	myo-Inositol 6-phosphate	Glucose 6-phosphate		Not Available	VMH	30371894
MMDBr0007902	myo-Inositol 6-phosphate	myo-Inositol		Not Available	VMH	30371894
MMDBr0007903	Myo-inositol 1-phosphate	myo-Inositol		Not Available	VMH	30371894
MMDBr0007904	D-Myo-inositol 4-phosphate	myo-Inositol		Not Available	VMH	30371894
MMDBr0008121	Menaquinone MK-7	Menaquinone MK-7		Not Available	VMH	30371894
MMDBr0006954	CMP-3-Deoxy-D-manno-octulosonate	Cytidine monophosphate		Not Available	VMH	30371894
MMDBr0001689	5'-Methylthioadenosine	5-Methylthioribose 1-phosphate		Not Available	VMH	30371894
MMDBr0007492	5,10-Methenyltetrahydrofolic acid	10-Formyltetrahydrofolic acid		Not Available	VMH	30371894
MMDBr0007493	5,10-Methylene-THF	5,10-Methenyltetrahydrofolic acid		Not Available	VMH	30371894
MMDBr0008135	5,10-Methylene-THF	5,10-Methenyltetrahydrofolic acid		Not Available	VMH	30371894
MMDBr0008130	5-Methylthioribose 1-phosphate	5-Methylthioribulose 1-phosphate		Not Available	VMH	30371894
MMDBr0008409	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	N(5)-formyl-5,6,7,8-tetrahydromethanopterin		Not Available	VMH	30371894
MMDBr0006991	Nicotinic acid	Nicotinic acid		Not Available	VMH	30371894
MMDBr0008392	MK-8	Menaquinol 8		Not Available	VMH	30371894
MMDBr0008393	2-Demethylmenaquinone 8	2-Demethylmenaquinol 8		Not Available	VMH	30371894
MMDBr0007495	Thymidine 5'-triphosphate	dTDP		Not Available	VMH	30371894
MMDBr0007650	Nicotinic acid adenine dinucleotide	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0008485	Niacinamide	Niacinamide		Not Available	VMH	30371894
MMDBr0007498	Guanosine diphosphate	Guanosine triphosphate		Not Available	VMH	30371894
MMDBr0007499	Uridine 5'-diphosphate	Uridine triphosphate		Not Available	VMH	30371894
MMDBr0007500	CDP	Cytidine triphosphate		Not Available	VMH	30371894
MMDBr0007501	dTDP	Thymidine 5'-triphosphate		Not Available	VMH	30371894
MMDBr0007503	dUDP	Deoxyuridine triphosphate		Not Available	VMH	30371894
MMDBr0007504	dCDP	dCTP		Not Available	VMH	30371894
MMDBr0007506	IDP	Inosine triphosphate		Not Available	VMH	30371894
MMDBr0001763	Niacinamide	Nicotinamide ribotide		Not Available	VMH	30371894
MMDBr0007915	Niacinamide	Nicotinic acid		Not Available	VMH	30371894
MMDBr0007508	Phosphoribosyl pyrophosphate	Nicotinic acid mononucleotide		Not Available	VMH	30371894
MMDBr0007127	Nitrate	Nitrate		Not Available	VMH	30371894
MMDBr0007510	dUMP	Deoxyuridine		Not Available	VMH	30371894
MMDBr0007644	Xanthylic acid	Xanthosine		Not Available	VMH	30371894
MMDBr0007645	Inosinic acid	Inosine		Not Available	VMH	30371894
MMDBr0007637	Uridine 5'-monophosphate	Uridine		Not Available	VMH	30371894
MMDBr0007638	Cytidine monophosphate	Cytidine		Not Available	VMH	30371894
MMDBr0007639	5-Thymidylic acid	Thymidine		Not Available	VMH	30371894
MMDBr0007640	Deoxyadenosine monophosphate	Deoxyadenosine		Not Available	VMH	30371894
MMDBr0007642	2'-Deoxyguanosine 5'-monophosphate	Deoxyguanosine		Not Available	VMH	30371894
MMDBr0007643	Guanosine monophosphate	Guanosine		Not Available	VMH	30371894
MMDBr0006995	Thymidine 5'-triphosphate	5-Thymidylic acid		Not Available	VMH	30371894
MMDBr0007129	Carbamoylphosphate	Citrulline		Not Available	VMH	30371894
MMDBr0007930	Stearic acid	Stearic acid		Not Available	VMH	30371894
MMDBr0001818	Stearic acid	Stearic acid		Not Available	VMH	11788354; 12864740
MMDBr0006957	2-Octaprenyl-6-hydroxyphenol	2-Octaprenyl-6-methoxyphenol		Not Available	VMH	30371894
MMDBr0006958	Ketoleucine	Isovaleryl-CoA		Not Available	VMH	30371894
MMDBr0006984	alpha-Ketoisovaleric acid	Isobutyryl-CoA		Not Available	VMH	30371894
MMDBr0006959	3-Methyl-2-oxovaleric acid	2-Methylbutyryl-CoA		Not Available	VMH	30371894
MMDBr0007514	Orotidylic acid	Uridine 5'-monophosphate		Not Available	VMH	30371894
MMDBr0006999	2-Octaprenyl-6-methoxyphenol	2-Octaprenyl-6-methoxy-1,4-benzoquinol		Not Available	VMH	30371894
MMDBr0007515	3-Octaprenyl-4-hydroxybenzoate	2-Octaprenylphenol		Not Available	VMH	30371894
MMDBr0007000	2-Octaprenylphenol	2-Octaprenyl-6-hydroxyphenol		Not Available	VMH	30371894
MMDBr0007932	Ornithine	Putrescine		Not Available	VMH	30371894
MMDBr0007130	N2-Acetylornithine	N-Acetylglutamic acid		Not Available	VMH	30371894
MMDBr0007516	Orotic acid	Orotidylic acid		Not Available	VMH	30371894
MMDBr0007517	L-Proline	L-D-1-Pyrroline-5-carboxylic acid		Not Available	VMH	30371894
MMDBr0007518	Lead	Lead		Not Available	VMH	30371894
MMDBr0006960	Hydrogen carbonate	Oxalacetic acid		Not Available	VMH	30371894
MMDBr0006961	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006962	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006963	Precorrin 6A	Precorrin 6B		Not Available	VMH	30371894
MMDBr0006964	S-Adenosylmethionine	S-Adenosylhomocysteine		Not Available	VMH	30371894
MMDBr0006965	Precorrin 8	Hydrogenobyrinate		Not Available	VMH	30371894
MMDBr0007935	Dihydrolipoamide	Lipoamide		Not Available	VMH	30371894
MMDBr0007519	D-Glucosamine 1-phosphate	Glucosamine 6-phosphate		Not Available	VMH	30371894
MMDBr0007520	3-Phospho-D-glycerate	Phosphohydroxypyruvic acid		Not Available	VMH	30371894
MMDBr0007521	Glucose 6-phosphate	Fructose 6-phosphate		Not Available	VMH	30371894
MMDBr0007522	3-Phospho-D-glycerate	Glyceric acid 1,3-biphosphate		Not Available	VMH	30371894
MMDBr0007938	Phosphoglycolic acid	Glycolic acid		Not Available	VMH	30371894
MMDBr0007524	2-Phospho-D-glyceric acid	3-Phospho-D-glycerate		Not Available	VMH	30371894
MMDBr0007525	Glucose 1-phosphate	Glucose 6-phosphate		Not Available	VMH	30371894
MMDBr0007939	Oxoglutaric acid	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007634	L-Phenylalanine	L-Phenylalanine		Not Available	VMH	30371894
MMDBr0008529	Acetoacetyl-CoA	3-Hydroxybutyryl-CoA		Not Available	VMH	30371894
MMDBr0007529	Glyceraldehyde 3-phosphate	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007530	D-Mannose 1-phosphate	Mannose 6-phosphate		Not Available	VMH	30371894
MMDBr0007531	4-Amino-2-methyl-5-phosphomethylpyrimidine	2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate		Not Available	VMH	30371894
MMDBr0007533	Pantothenic acid	D-4'-Phosphopantothenate		Not Available	VMH	30371894
MMDBr0007159	Pantothenic acid	Pantothenic acid		Not Available	VMH	30371894
MMDBr0007536	5-Aminolevulinic acid	Porphobilinogen		Not Available	VMH	30371894
MMDBr0007537	4-Phosphopantothenoylcysteine	Pantetheine 4'-phosphate		Not Available	VMH	30371894
MMDBr0007539	Ribose-1-phosphate	D-Ribose-5-phosphate		Not Available	VMH	30371894
MMDBr0007540	D-4'-Phosphopantothenate	4-Phosphopantothenoylcysteine		Not Available	VMH	30371894
MMDBr0007209	Prephenate	4-Hydroxyphenylpyruvic acid		Not Available	VMH	30371894
MMDBr0007210	Prephenate	4-Hydroxyphenylpyruvic acid		Not Available	VMH	30371894
MMDBr0007134	Prephenate	Phenylpyruvic acid		Not Available	VMH	30371894
MMDBr0007542	Glycine	Glycineamideribotide		Not Available	VMH	30371894
MMDBr0007944	Phosphoribosylformylglycineamidine	5-Aminoimidazole ribonucleotide		Not Available	VMH	30371894
MMDBr0007945	5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate	SAICAR		Not Available	VMH	30371894
MMDBr0007135	1-(5-phosphoribosyl)-ATP	1-(5-Phosphoribosyl)-AMP		Not Available	VMH	30371894
MMDBr0007946	5'-Phosphoribosyl-N-formylglycineamide	Phosphoribosylformylglycineamidine		Not Available	VMH	30371894
MMDBr0007543	L-Proline	L-D-1-Pyrroline-5-carboxylic acid		Not Available	VMH	30371894
MMDBr0007545	L-Proline	L-Proline		Not Available	VMH	30371894
MMDBr0007547	D-Ribose-5-phosphate	Phosphoribosyl pyrophosphate		Not Available	VMH	30371894
MMDBr0007548	Phosphohydroxypyruvic acid	Oxoglutaric acid		Not Available	VMH	30371894
MMDBr0008456	(2R)-O-phospho-3-sulfolactic acid	Phosphoenolpyruvic acid		Not Available	VMH	30371894
MMDBr0007549	Phosphoserine	L-Serine		Not Available	VMH	30371894
MMDBr0007552	Pantetheine 4'-phosphate	Dephospho-CoA		Not Available	VMH	30371894
MMDBr0007560	Dihydroxyacetone phosphate	Quinolinic acid		Not Available	VMH	30371894
MMDBr0006970	L-Glutamine	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007561	Riboflavin	Flavin mononucleotide		Not Available	VMH	30371894
MMDBr0007141	Riboflavin	Riboflavin		Not Available	VMH	30371894
MMDBr0007564	D-Ribose-5-phosphate	D-Ribulose 5-phosphate		Not Available	VMH	30371894
MMDBr0007565	D-Sedoheptulose 7-phosphate	D-Glycero-D-manno-heptose 7-phosphate		Not Available	VMH	30371894
MMDBr0007215	L-Serine	O-Acetyl-L-serine		Not Available	VMH	30371894
MMDBr0006974	Cobalt	Cobalt-precorrin 2		Not Available	VMH	30371894
MMDBr0006975	Sirohydrochlorin	Siroheme		Not Available	VMH	30371894
MMDBr0006990	Siroheme	Siroheme		Not Available	VMH	30371894
MMDBr0007144	Hydrogen sulfide	Homocysteine		Not Available	VMH	30371894
MMDBr0006976	Spermidine	Spermidine		Not Available	VMH	30371894
MMDBr0007572	Succinic acid	Succinic acid		Not Available	VMH	30371894
MMDBr0007573	Succinic acid	Fumaric acid		Not Available	VMH	30371894
MMDBr0010895	MK-8	Fumaric acid		Not Available	VMH	30371894
MMDBr0007147	Succinic acid	Succinyl-CoA		Not Available	VMH	30371894
MMDBr0007574	Glyceraldehyde 3-phosphate	D-Erythrose 4-phosphate		Not Available	VMH	30371894
MMDBr0007148	Taurine	Taurine		Not Available	VMH	30371894
MMDBr0012624	Taurochenodesoxycholic acid	Chenodeoxycholic acid		Not Available	VMH	30371894
MMDBr0012625	Taurocholic acid	Cholic acid		Not Available	VMH	30371894
MMDBr0007970	4,6-Dideoxy-4-oxo-dTDP-D-glucose	dTDP-4-Dehydro-6-deoxy-L-mannose		Not Available	VMH	30371894
MMDBr0007971	dTDP-4-Dehydro-6-deoxy-L-mannose	Deoxythymidine diphosphate-L-rhamnose		Not Available	VMH	30371894
MMDBr0007972	dTDP-D-Glucose	4,6-Dideoxy-4-oxo-dTDP-D-glucose		Not Available	VMH	30371894
MMDBr0007576	Thymidine	Thymidine		Not Available	VMH	30371894
MMDBr0007151	Thiamine	Thiamine		Not Available	VMH	30371894
MMDBr0007577	O-Phosphohomoserine	L-Threonine		Not Available	VMH	30371894
MMDBr0007631	L-Threonine	L-Threonine		Not Available	VMH	30371894
MMDBr0007578	D-Ribose-5-phosphate	Glyceraldehyde 3-phosphate		Not Available	VMH	30371894
MMDBr0007579	D-Erythrose 4-phosphate	Fructose 6-phosphate		Not Available	VMH	30371894
MMDBr0007580	Thymidine	5-Thymidylic acid		Not Available	VMH	30371894
MMDBr0008412	Guanosine triphosphate	5-Thymidylic acid		Not Available	VMH	30371894
MMDBr0007980	dUMP	Dihydrofolic acid		Not Available	VMH	30371894
MMDBr0012619	Thiamine	Thiamine monophosphate		Not Available	VMH	30371894
MMDBr0012620	Thiamine monophosphate	Thiamine pyrophosphate		Not Available	VMH	30371894
MMDBr0007583	2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate	Thiamine monophosphate		Not Available	VMH	30371894
MMDBr0007584	Dihydroxyacetone phosphate	Glyceraldehyde 3-phosphate		Not Available	VMH	30371894
MMDBr0012657	Indole	L-Tryptophan		Not Available	VMH	30371894
MMDBr0012658	Oxoglutaric acid	L-Glutamic acid		Not Available	VMH	30371894
MMDBr0007152	L-Tryptophan	L-Tryptophan		Not Available	VMH	30371894
MMDBr0007986	Myristic acid	Myristic acid		Not Available	VMH	30371894
MMDBr0002287	Myristic acid	Myristic acid		Not Available	VMH	10811962; 11161786
MMDBr0007987	Oxoglutaric acid	4-Hydroxyphenylpyruvic acid		Not Available	VMH	30371894
MMDBr0007636	L-Tyrosine	L-Tyrosine		Not Available	VMH	30371894
MMDBr0007586	Meso-2,6-Diaminoheptanedioate	UDP-N-Acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate		Not Available	VMH	30371894
MMDBr0006980	Uridine diphosphate-N-acetylglucosamine	UDP-N-Acetyl-D-mannosamine		Not Available	VMH	30371894
MMDBr0006981	Uridine diphosphate-N-acetylglucosamine	N-Acetylmannosamine		Not Available	VMH	30371894
MMDBr0007587	Uridine diphosphate-N-acetylglucosamine	Uridine diphosphate-N-acetylgalactosamine		Not Available	VMH	30371894
MMDBr0007588	N-Acetyl-glucosamine 1-phosphate	Uridine diphosphate-N-acetylglucosamine		Not Available	VMH	30371894
MMDBr0007589	D-Glutamate	UDP-N-Acetylmuramoyl-L-alanyl-D-glutamate		Not Available	VMH	30371894
MMDBr0007590	Undecaprenyl diphosphate	Undecaprenyl phosphate		Not Available	VMH	30371894
MMDBr0007591	Uridine diphosphate glucose	Uridine diphosphategalactose		Not Available	VMH	30371894
MMDBr0007153	Uridine diphosphategalactose	UDP-D-Galacto-1,4-furanose		Not Available	VMH	30371894
MMDBr0007990	Uridine diphosphate glucose	UDP-Glucuronic acid		Not Available	VMH	30371894
MMDBr0007593	Hydroxymethylbilane	Uroporphyrinogen III		Not Available	VMH	30371894
MMDBr0008386	Uridine 5'-monophosphate	Uridine 5'-diphosphate		Not Available	VMH	30371894
MMDBr0007597	Uridine	Uridine		Not Available	VMH	30371894
MMDBr0006983	UDP-2,3-Bis(3-hydroxytetradecanoyl)glucosamine	2,3-Bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate		Not Available	VMH	30371894
MMDBr0007598	Oxoglutaric acid	alpha-Ketoisovaleric acid		Not Available	VMH	30371894
MMDBr0008113	Potassium	Potassium		Not Available	VMH	30371894
MMDBr0002459	Guanosine triphosphate	Formamidopyrimidine nucleoside triphosphate		Not Available	VMH	10727395
MMDBr0007606	Propinol adenylate	Propionyl-CoA		Not Available	VMH	30371894
MMDBr0007607	Propionic acid	Propinol adenylate		Not Available	VMH	30371894
MMDBr0007612	D-4'-Phosphopantothenate	4-Phosphopantothenoylcysteine		Not Available	VMH	30371894
MMDBr0002669	Dihydroneopterin triphosphate	2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine		Not Available	VMH	10727395
MMDBr0002705	Formamidopyrimidine nucleoside triphosphate	Formic acid		Not Available	VMH	10727395
MMDBr0002707	2,5-Diaminopyrimidine nucleoside triphosphate	2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine		Not Available	VMH	10727395
MMDBr0002946	Formaldehyde	Formaldehyde		Not Available	VMH	30371894
MMDBr0012860	(2R)-2-phosphoglyceric acid	Phosphoenolpyruvic acid	Enolase	Enolization	RHEA	34755880
MMDBr0012883	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012884	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012895	Orotidylic acid	Phosphoribosyl pyrophosphate	Orotate phosphoribosyltransferase	Transfer of a ribosyl group	RHEA	34755880
MMDBr0012948	(S)-malate(2-)	Oxalacetic acid	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012954	L-Aspartic acid	Argininosuccinic acid	Argininosuccinate synthase	Synthesis	RHEA	34755880
MMDBr0012970	D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Imidazoleglycerol-phosphate dehydratase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0013026	Orotidylic acid	Uridine 5'-monophosphate	Orotidine 5'-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013027	CMP	CDP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013038	N-(5-Phospho-D-ribosyl)anthranilate	Phosphoribosyl pyrophosphate	Tryptophan biosynthesis protein TrpCD	Transfer of a ribosyl group	RHEA	34755880
MMDBr0013221	(R)-2,3-Dihydroxy-3-methylpentanoate	(S)-2-ethyl-2-hydroxy-3-oxobutanoic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0013226	5-Thymidylic acid	dTDP	Putative thymidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0013245	L-Homoserine	O-Acetyl-L-homoserine	L-serine/homoserine O-acetyltransferase	N-Acetylation; Synthesis	RHEA	34755880
MMDBr0013295	(S)-4-Amino-5-oxopentanoate	5-Aminolevulinic acid	Glutamate-1-semialdehyde 2,1-aminomutase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0013333	N-Acetylglutamic acid	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Phosphorylation	RHEA	34755880
MMDBr0013431	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	Isomerization	RHEA	34755880
MMDBr0013458	Guanosine triphosphate	Guanosine diphosphate	Adenylosuccinate synthetase	Synthesis	RHEA	34755880
MMDBr0013470	(2R)-2-phosphoglyceric acid	(2R)-3-phosphoglyceric acid	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0013547	Uridine triphosphate	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0013655	5-Phosphoribosylamine	N(1)-(5-phospho-beta-D-ribosyl)glycinamide	Phosphoribosylamine--glycine ligase	Ligation	RHEA	34755880
MMDBr0013681	Shikimate	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013728	(2E,6E,10E)-geranylgeranyl diphosphate	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	Digeranylgeranylglyceryl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0013770	Inosinic acid	Phosphoribosyl formamidocarboxamide	Bifunctional purine biosynthesis protein PurH	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0013848	dCTP	dUMP	dCTP deaminase, dUMP-forming	Deamination	RHEA	34755880
MMDBr0013884	L-Aspartic acid	beta-Alanine	L-aspartate decarboxylase dtxS4	Decarboxylation	RHEA	34755880
MMDBr0013886	Carbamoylphosphate	Citrulline	Ornithine carbamoyltransferase	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013941	S-Methyl-5-thio-alpha-D-ribose 1-phosphate	5-Methylthioribulose 1-phosphate	5-deoxyribose 1-phosphate isomerase	Isomerization	RHEA	34755880
MMDBr0013946	Carbamoylphosphate	N-carbamoyl-L-aspartate	Protein pyrABCN	Transfer of a carbamoyl group	RHEA	34755880
MMDBr0013952	1-(5-phosphoribosyl)-5'-AMP	1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide	Histidine biosynthesis bifunctional protein HisIE	Hydrolysis; Synthesis	RHEA	34755880
MMDBr0014024	S-Adenosylhomocysteine	S-inosyl-L-homocysteine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014025	S-Adenosylhomocysteine	S-inosyl-L-homocysteine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014061	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Chorismate	Chorismate synthase	Synthesis	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0014083	Shikimate 3-phosphate	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Pentafunctional AROM polypeptide	Synthesis; Dehydration and isomerisation; Oxidation; Phosphorylation; Transfer of a carboxyvinyl group	RHEA	34755880
MMDBr0014102	Sn-Glycerol-1-phosphate	Dihydroxyacetone phosphate	Glycerol-1-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0014103	Sn-Glycerol-1-phosphate	Dihydroxyacetone phosphate	Glycerol-1-phosphate dehydrogenase [NAD(P)+]	Dehydrogenation	RHEA	34755880
MMDBr0014105	(S)-malate(2-)	Oxalacetic acid	Malate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0014117	N-Acetyl-L-glutamate 5-semialdehyde	N-Acetyl-L-glutamyl 5-phosphate	Protein ARG5,6, mitochondrial	Reduction	RHEA	34755880
MMDBr0014167	(R)-2,3-Dihydroxy-isovalerate	(2S)-2-acetolactic acid	Ketol-acid reductoisomerase, mitochondrial	Isomerization	RHEA	34755880
MMDBr0014214	Guanosine triphosphate	2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one	GTP cyclohydrolase III	Hydrolysis	RHEA	34755880
MMDBr0014256	1-(5-phosphoribosyl)-ATP	1-(5-phosphoribosyl)-5'-AMP	Phosphoribosyl-ATP pyrophosphatase	Dephosphorylation; Synthesis	RHEA	34755880
MMDBr0014327	(2E,6E,10E)-geranylgeranyl diphosphate	sn-3-O-(geranylgeranyl)glycerol 1-phosphate	Geranylgeranylglyceryl phosphate synthase	Synthesis	RHEA	34755880
MMDBr0014333	alpha-D-Glucosamine 1-phosphate	D-glucosamine 6-phosphate	Phosphoglucosamine mutase	Intramolecular transfer of functional group	RHEA	34755880
MMDBr0014367	Adenine	Hypoxanthine	Adenine deaminase	Deamination	RHEA	34755880
MMDBr0014377	alpha-Ketoglutarate	3-(Imidazol-4-yl)-2-oxopropyl phosphate	Histidinol-phosphate aminotransferase	Amine group addition	RHEA	34755880
MMDBr0014405	LL-2,6-Diaminoheptanedioate	(S)-2,3,4,5-tetrahydrodipicolinate	LL-diaminopimelate aminotransferase	Amine group addition	RHEA	34755880
MMDBr0014407	Argininosuccinic acid	fumarate	Bifunctional protein ArgHA	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014426	4-Methyl-5-(2-hydroxyethyl)-thiazole	4-methyl-5-(2-phosphooxyethyl)-thiazole	Probable thiamine biosynthetic bifunctional enzyme	Phosphorylation	RHEA	34755880
MMDBr0014437	L-Dihydroorotic acid	N-carbamoyl-L-aspartate	Dihydroorotase	Hydrolysis	RHEA	34755880
MMDBr0014447	Uridine 5'-monophosphate	Uridine 5'-diphosphate	UMP-CMP kinase	Phosphorylation	RHEA	34755880
MMDBr0014449	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014450	Deoxyadenosine	Inosine	Adenosine deaminase	Deamination; Phosphorylation	RHEA	34755880
MMDBr0014474	5,6,7,8-Tetrahydromethanopterin	5,10-Methylenetetrahydromethanopterin	5,6,7,8-tetrahydromethanopterin hydro-lyase	Non-hydrolytic bond cleavage (or its reversal)	RHEA	34755880
MMDBr0014486	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014487	(R)-2,3-Dihydroxy-isovalerate	alpha-Ketoisovaleric acid	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014491	AICAR	Phosphoribosyl formamidocarboxamide	5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase	Synthesis	RHEA	34755880
MMDBr0017917	5-Aminoimidazole ribonucleotide	4-Amino-2-methyl-5-phosphomethylpyrimidine	Phosphomethylpyrimidine synthase	Synthesis	RHEA	34755880
MMDBr0014504	Cytidine triphosphate	CDP	Riboflavin kinase	Phosphorylation	RHEA	34755880
MMDBr0014505	5'-Methylthioadenosine	S-methyl-5'-thioinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014506	5'-Methylthioadenosine	S-methyl-5'-thioinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0014514	dCMP	dCDP	Cytidylate kinase	Phosphorylation	RHEA	34755880
MMDBr0014522	D-Ribulose 5-phosphate	D-arabino-hex-3-ulose 6-phosphate	Bifunctional enzyme Fae/Hps	Synthesis	RHEA	34755880
MMDBr0014574	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	CDP-2,3-bis-O-(geranylgeranyl)-sn-glycerol	CDP-archaeol synthase	Synthesis	RHEA	34755880
MMDBr0014591	Guanosine triphosphate	7,8-dihydroneopterin 2',3'-cyclic phosphate	GTP cyclohydrolase MptA	Hydrolysis	RHEA	34755880
MMDBr0014601	2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonate	3-Dehydroquinate	3-dehydroquinate synthase	Synthesis	RHEA	34755880
MMDBr0014633	Co-precorrin-5B	Co-precorrin-6A	Cobalt-precorrin-5B C(1)-methyltransferase	Methylation	RHEA	34755880
MMDBr0017923	cob(II)yrinate	Cob(II)yrinate a,c diamide	Cobyrinate a,c-diamide synthase	Synthesis	RHEA	34755880
MMDBr0017926	L-Glutamine	Cytidine triphosphate	CTP synthase	Synthesis	RHEA	34755880
MMDBr0014662	2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one	2,5-diamino-6-hydroxy-4-(5-phospho-D-ribosylamino)pyrimidine	2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase	Removal of the N-terminal formyl group	RHEA	34755880
MMDBr0014718	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014719	(R)-2,3-Dihydroxy-3-methylpentanoate	2-Keto-3-methyl-valerate	Dihydroxy-acid dehydratase, mitochondrial	Hydration/dehydration of C-O bond	RHEA	34755880
MMDBr0014763	7-Deaza-7-carboxyguanine	7-Cyano-7-carbaguanine	7-cyano-7-deazaguanine synthase	Synthesis	RHEA	34755880
MMDBr0014783	di-trans,octa-cis-undecaprenyl diphosphate	di-trans,octa-cis-undecaprenyl phosphate	Undecaprenyl-diphosphatase BcrC	Dephosphorylation	RHEA	34755880
MMDBr0017950	aldehydo-D-ribose 5-phosphate	L-Glutamic acid	Pyridoxal 5'-phosphate synthase subunit PDX1	Synthesis	RHEA	34755880
MMDBr0015316	L-Aspartate-semialdehyde	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate synthase	Synthesis	RHEA	34755880
MMDBr0015402	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015405	(S)-2,3,4,5-tetrahydrodipicolinate	(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate	4-hydroxy-tetrahydrodipicolinate reductase	Reduction	RHEA	34755880
MMDBr0015852	(2R)-2,3-bisphosphoglyceric acid	cyclic (2R)-2,3-bisphosphoglyceric acid	Cyclic 2,3-diphosphoglycerate synthetase	Synthesis	RHEA	34755880
MMDBr0015878	5'-Deoxyadenosine	5'-deoxyinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0015879	5'-Deoxyadenosine	5'-deoxyinosine	5'-deoxyadenosine deaminase	Deamination	RHEA	34755880
MMDBr0017977	5,10-Methylenetetrahydromethanopterin	5,6,7,8-Tetrahydromethanopterin	Serine hydroxymethyltransferase	Methylation	RHEA	34755880
MMDBr0017985	L-Glutamine	L-Glutamic acid	Cobyrinate a,c-diamide synthase	Synthesis	RHEA	34755880
MMDBr0016659	5-Methyl-5,6,7,8-tetrahydromethanopterin	5,6,7,8-Tetrahydromethanopterin	Tetrahydromethanopterin S-methyltransferase subunit A	Methylation	RHEA	34755880
MMDBr0017101	3'-dephospho-CoA	Guanosine diphosphate	GTP-dependent dephospho-CoA kinase	Phosphorylation	RHEA	34755880
MMDBr0017356	(2S)-2-phospholactic acid	(2S)-lactyl-2-diphospho-5'-guanosine	2-phospho-L-lactate guanylyltransferase	Transfer of a GMP	RHEA	34755880
MMDBr0017843	L-Glutamine	GMP	GMP synthase [glutamine-hydrolyzing]	Synthesis	RHEA	34755880
MMDBr0017863	L-Tyrosine	Tyramine	Probable L-tyrosine/L-aspartate decarboxylase	Carboxylation	RHEA	34755880
MMDBr0017874	L-Glutamine	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017879	L-Glutamine	2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidine	Phosphoribosylformylglycinamidine synthase	Synthesis	RHEA	34755880
MMDBr0017897	L-Methionine	S-Adenosylmethionine	S-adenosylmethionine synthase	Synthesis	RHEA	34755880
MMDBr0017916	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamide	AICAR	Imidazole glycerol phosphate synthase subunit HisH	Synthesis	RHEA	34755880
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024418	L-Alanine	diphosphate	Alanine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024449	L-Methionine	diphosphate	Methionine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024474	L-Proline	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024483	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024542	5,10-Methylenetetrahydromethanopterin	5,10-Methenyl-5,6,7,8-tetrahydromethanopterin	F420-dependent methylenetetrahydromethanopterin dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0024568	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0024590	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0024597	L-Aspartic acid	diphosphate	Aspartate--tRNA(Asp/Asn) ligase	Ligation	RHEA	34755880
MMDBr0024628	L-Phenylalanine	Hydrogen Ion	Phenylalanine--tRNA ligase beta subunit	Ligation	RHEA	34755880
MMDBr0024656	L-Arginine	diphosphate	Arginine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024666	L-Lysine	diphosphate	Lysine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024745	L-Glutamic acid	diphosphate	Glutamate--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024787	L-Threonine	Hydrogen Ion	Threonine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024956	S-Adenosylmethionine	S-Adenosylhomocysteine	Diphthine synthase	Synthesis	RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase	Synthesis	RHEA	34755880
MMDBr0025060	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0025075	S-Adenosylmethionine	S-Adenosylhomocysteine	Ribosomal RNA large subunit methyltransferase E	Methylation	RHEA	34755880
MMDBr0025114	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (cytidine(56)-2'-O)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025124	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine(26)-N(2))-dimethyltransferase	Methylation	RHEA	34755880
MMDBr0025130	7-Cyano-7-carbaguanine	Guanine	tRNA-guanine(15) transglycosylase	Glycosidic bond hydrolysis	RHEA	34755880
MMDBr0025193	Adenosine triphosphate	ADP	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0025803	S-Adenosylmethionine	5'-Methylthioadenosine	16S rRNA aminocarboxypropyltransferase	Transfer of an aminocarboxypropyl group	RHEA	34755880
MMDBr0025844	2,3-bis-O-(phytanyl)-sn-glycerol 1-phosphate	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0025845	2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate	2,3-bis-O-(phytanyl)-sn-glycerol 1-phosphate	Digeranylgeranylglycerophospholipid reductase	Reduction	RHEA	34755880
MMDBr0026022	Adenosine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026023	Cytidine monophosphate	Adenosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026024	Uridine 5'-monophosphate	Uridine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026025	Guanosine monophosphate	Guanosine	5'-nucleotidase SurE	Hydrolysis of nucleotide; Dephosphorylation	RHEA	34755880
MMDBr0026046	Uridine 5'-diphosphate	Uridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026047	Uridine 5'-diphosphate	Cytidine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026048	Guanosine 3',5'-bis(diphosphate)	Guanosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026085	Deoxyuridine-5'-diphosphate	Deoxyuridine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026086	2'-Deoxycytidine 5'-diphosphate	Deoxycytidine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026087	2'-Deoxyadenosine 5'-diphosphate	Deoxyadenosine triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880
MMDBr0026088	2'-Deoxyguanosine 5'-diphosphate	2'-Deoxyguanosine 5'-triphosphate	Nucleoside diphosphate kinase	Phosphorylation	RHEA	34755880

Genome Data

Genome Link

MMDBm0001846

Genome Length

1792652 bp

# Predicted Proteins

1652

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-20 19:06:36 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_007681