MiMeDB: Pseudomonas aeruginosa (MMDBm0000252)

Microbe Identification

Microbe name

Pseudomonas aeruginosa

NCBI Taxonomy ID

287

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Species

aeruginosa

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Yes

Flagellar presence

Yes

Number of membranes

Oxygen preference

Aerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

Multiple

Biotic relationship

Free living

Cell arrangement

Singles

Sporulation

Singles

Metabolism

Not Available

Energy source

Heterotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human			Not Available	Human Oral Microbiome Database (HOMD)	20624719
Human	Lower respiratory tract		Not Available	BacDive	34718743
Human	Leg		Not Available	BacDive	34718743
Human	Rectum		Not Available	BacDive	34718743
Human	Skin		Not Available	BacDive	34718743
Human	Gallbladder		Not Available	BacDive	34718743
Human	Bronchi		Not Available	BacDive	34718743
Human	Large intestine		Not Available	BacDive	34718743
Human	Trachea		Not Available	BacDive	34718743
Human	Inner cheek		Not Available	BacDive	34718743
Human	Lung	Sputum	Not Available	Disbiome	25403149
Human	Gingiva	Subgingival plaque	Not Available	Disbiome	27717873
Human	Large intestine	Feces	Not Available	Disbiome	25784074

Health Effects

Host	Related Health Condition	Microbal response/effect	Data Source	Reference
Human	Cystic fibrosis		BacDive
Human	Chronic obstructive pulmonary disease	Elevated	Disbiome	25403149
Human	Irritable bowel syndrome	Elevated	Disbiome	25784074

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024422	Acetyl-CoA	Hydrogen Ion	Aminoglycoside N(3)-acetyltransferase IV	N-Acetylation	RHEA	34755880
MMDBr0024479	gentamicin C	Hydrogen Ion	Gentamicin 3-N-acetyltransferase	Acetylation	RHEA	34755880
MMDBr0024497	S-Adenosylmethionine	S-Adenosylhomocysteine	Type I restriction enzyme MjaVII methylase subunit	Methylation	RHEA	34755880
MMDBr0036118	N-eicosanoyl-sphing-4-enine	Arachidic acid	Neutral ceramidase	Hydrolysis	RHEA	34755880
MMDBr0036119	Ceramide (d18:1/18:0)	Octadecanoate (N-C18:0)	Neutral ceramidase	Hydrolysis	RHEA	34755880
MMDBr0036120	N-(hexanoyl)sphing-4-enine	Hexanoate (N-C6:0)	Neutral ceramidase	Hydrolysis	RHEA	34755880
MMDBr0036121	N-(9Z-octadecenoyl)-sphing-4-enine	(9Z)-octadecenoic acid	Neutral ceramidase	Hydrolysis	RHEA	34755880
MMDBr0036122	N-tetracosanoyl-sphing-4-enine	tetracosanoic acid	Neutral ceramidase	Hydrolysis	RHEA	34755880
MMDBr0036123	Cer(d18:1/16:0)	hexadecanoic acid	Neutral ceramidase	Hydrolysis	RHEA	34755880
MMDBr0024341	S-Adenosylmethionine	5'-Methylthioadenosine	Acyl-homoserine-lactone synthase	Synthesis	RHEA	34755880

Genome Data

Genome Link

MMDBm0000252

Genome Length

6353896 bp

# Predicted Proteins

5878

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:47:49 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_002516

MiMeDB ID	Organism	Strain	Serotype	Variant	NCBI Taxonomy	BaSyS2 Genome
MMDBm0002391	Pseudomonas aeruginosa PAO1	PAO1	-	-	208964	View
MMDBm0002399	Pseudomonas aeruginosa UCBPP-PA14	UCBPP-PA14	-	-	208963	View
MMDBm0002404	Pseudomonas aeruginosa PA7	PA7	-	-	381754	View
MMDBm0002407	Pseudomonas aeruginosa LESB58	LESB58	-	-	557722	View
MMDBm0580104	Pseudomonas aeruginosa NCGM2.S1	S1	-	-	1089456	View
MMDBm0580112	Pseudomonas aeruginosa PA103	PA103	-	-	1081927	View
MMDBm0580208	Pseudomonas alcaligenes	-	-	-	43263	View
MMDBm0580210	Pseudomonas alcaligenes NBRC 14159	NBRC 14159	-	-	1215092	View
MMDBm0881874	Pseudomonas aeruginosa ATCC 7700	ATCC 7700	-	-	https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=&lvl=3&lin=f&keep=1&srchmode=5&unlock	View