MiMeDB: Streptococcus pneumoniae (MMDBm0000436)

Microbe Identification

Microbe name

Streptococcus pneumoniae

NCBI Taxonomy ID

1313

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Firmicutes

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Streptococcus

Species

pneumoniae

Microbe Properties

Gram staining properties

Positive

Shape

Cocci

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Facultative anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

Multiple

Biotic relationship

Free living

Cell arrangement

Chains - Pairs

Sporulation

Chains - Pairs

Metabolism

Not Available

Energy source

Not Available

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human			Not Available	Human Oral Microbiome Database (HOMD)	20624719
Human	Nasopharynx		Not Available	BacDive	34718743
Human	Lower respiratory tract		Not Available	BacDive	34718743
Human	Trachea		Not Available	BacDive	34718743
Human	Lung	Sputum	Not Available	Disbiome	25403149
Human	Large intestine	Feces	Not Available	Disbiome	30356183

Health Effects

Host	Related Health Condition	Microbal response/effect	Data Source	Reference
Human	Bronchitis		BacDive
Human	Chronic obstructive pulmonary disease	Elevated	Disbiome	25403149
Human	Pneumonia	Elevated	Disbiome	30787368
Human	Kawasaki Disease	Reduced	Disbiome	26322033

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024355	L-Tyrosine	Hydrogen Ion	Tyrosine-protein kinase ptk	Phosphorylation	RHEA	34755880
MMDBr0024497	S-Adenosylmethionine	S-Adenosylhomocysteine	Type I restriction enzyme MjaVII methylase subunit	Methylation	RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0025091	S-Adenosylmethionine	S-Adenosylhomocysteine	rRNA adenine N-6-methyltransferase	Methylation	RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0025786	L-Cysteine	L-Cystine	Peroxiredoxin	Oxidation	RHEA	34755880
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024360	L-Valine	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024371	L-Asparagine	Hydrogen Ion	Asparagine--tRNA ligase	Ligation	RHEA	34755880

Genome Data

Genome Link

MMDBm0000436

Genome Length

2179041 bp

# Predicted Proteins

2132

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-25 17:22:11 UTC

Reference

PMID: 17704766

Source Links

GenBank

NZ_CP020549

MiMeDB ID	Organism	Strain	Serotype	Variant	NCBI Taxonomy	BaSyS2 Genome
MMDBm0002585	Streptococcus pneumoniae TIGR4	TIGR4	-	-	170187	View
MMDBm0002586	Streptococcus pneumoniae R6	R6	-	-	171101	View
MMDBm0002602	Streptococcus pneumoniae D39	D39	-	-	373153	View
MMDBm0002608	Streptococcus pneumoniae Hungary19A-6	-6	-	-	487214	View
MMDBm0002609	Streptococcus pneumoniae CGSP14	CGSP14	-	-	516950	View
MMDBm0002610	Streptococcus pneumoniae G54	G54	-	-	512566	View
MMDBm0002613	Streptococcus pneumoniae ATCC 700669	ATCC 700669	-	-	561276	View
MMDBm0002615	Streptococcus pneumoniae JJA	JJA	-	-	488222	View
MMDBm0002616	Streptococcus pneumoniae P1031	P1031	-	-	488223	View
MMDBm0002617	Streptococcus pneumoniae 70585	70585	-	-	488221	View
MMDBm0002618	Streptococcus pneumoniae Taiwan19F-14	-14	-	-	487213	View
MMDBm0002626	Streptococcus pneumoniae TCH8431/19A	19A	-	-	525381	View
MMDBm0002627	Streptococcus pneumoniae AP200	AP200	-	-	574093	View
MMDBm0002628	Streptococcus pneumoniae 670-6B	670-6B	-	-	189423	View