MiMeDB: Aspergillus oryzae RIB40 (MMDBm0028980)

Microbe Identification

Microbe name

Aspergillus oryzae RIB40

NCBI Taxonomy ID

510516

Microbe Taxonomy

Superkingdom

Eukaryota

Kingdom

Fungi

Phylum

Ascomycota

Class

Eurotiomycetes

Order

Eurotiales

Family

Aspergillaceae

Genus

Aspergillus

Species

oryzae

Strain

Microbe Properties

Gram staining properties

Positive

Shape

Not Available

Mobility

Flagellar presence

Number of membranes

Not Available

Oxygen preference

Aerobic

Optimal temperature

Not Available

Temperature range

Not Available

Habitat

Not Available

Biotic relationship

Not Available

Cell arrangement

Septated hyphae

Sporulation

Sporulating (ascospores); reproduction also by budding

Metabolism

Not Available

Energy source

Osmotrophic

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0012860	(2R)-2-phosphoglyceric acid	Phosphoenolpyruvic acid	Enolase	Enolization	RHEA	34755880
MMDBr0012884	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0012885	D-Glyceraldehyde 3-phosphate	(2R)-3-phospho-glyceroyl phosphate	Glyceraldehyde-3-phosphate dehydrogenase B	Dehydrogenation	RHEA	34755880
MMDBr0012960	D-Xylulose	Xylulose 5-phosphate	Probable D-xylulose kinase A	Phosphorylation	RHEA	34755880
MMDBr0013026	Orotidylic acid	Uridine 5'-monophosphate	Orotidine 5'-phosphate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0013045	Alpha-D-glucose 6-phosphate	beta-D-Fructose 6-phosphate	Glucose-6-phosphate isomerase	Isomerization	RHEA	34755880
MMDBr0013078	D-Mannitol	D-Fructose	Mannitol dehydrogenase DSF1	Dehydrogenation	RHEA	34755880
MMDBr0013187	Shikimate	Shikimate 3-phosphate	Pentafunctional AROM polypeptide	Phosphorylation	RHEA	34755880
MMDBr0013307	Riboflavin	Flavin mononucleotide	Bifunctional riboflavin kinase/FMN adenylyltransferase	Phosphorylation	RHEA	34755880
MMDBr0013347	beta-D-Fructose 1,6-bisphosphate	D-Glyceraldehyde 3-phosphate	Fructose-bisphosphate aldolase	Aldol addition (or reverse)	RHEA	34755880
MMDBr0013357	(2R)-3-phosphoglyceric acid	(2R)-3-phospho-glyceroyl phosphate	Phosphoglycerate kinase	Phosphorylation	RHEA	34755880
MMDBr0013404	alpha-D-mannose 1-phosphate	Guanosine diphosphate mannose	Alginate biosynthesis protein AlgA	Synthesis	RHEA	34755880
MMDBr0013416	L-Glutamic acid	Ornithine	Arginine biosynthesis bifunctional protein ArgJ	Acetylation; Synthesis	RHEA	34755880
MMDBr0013432	(1R,2S)-homoisocitrate	cis-homoaconitate	Probable methanogen homoaconitase large subunit	Hydrolysis	RHEA	34755880
MMDBr0013437	5-Methylthioribulose 1-phosphate	5-(methylsulfanyl)-2,3-dioxopentyl phosphate	Probable bifunctional methylthioribose-1-phosphate isomerase/methylthioribulose-1-phosphate dehydratase	Dehydration and isomerisation	RHEA	34755880
MMDBr0013458	Guanosine triphosphate	Guanosine diphosphate	Adenylosuccinate synthetase	Synthesis	RHEA	34755880
MMDBr0013495	beta-D-Fructose 6-phosphate	beta-D-Fructose 1,6-bisphosphate	ATP-dependent 6-phosphofructokinase	Phosphorylation	RHEA	34755880
MMDBr0013524	digallate	Gallic acid	Tannase	Not Available	RHEA	34755880
MMDBr0013570	L-Kynurenine	2-Aminobenzoic acid	Kynureninase	Cleavage of kynurenine	RHEA	34755880
MMDBr0013681	Shikimate	3-Dehydroshikimic acid	Pentafunctional AROM polypeptide	Dehydrogenation	RHEA	34755880
MMDBr0013706	3-Hydroxyanthranilic acid	(2Z,4Z)-2-amino-3-carboxymuconic acid 6-semialdehyde	3-hydroxyanthranilate 3,4-dioxygenase	Oxygenation	RHEA	34755880
MMDBr0013784	D-Glyceraldehyde 3-phosphate	Dihydroxyacetone phosphate	Bifunctional PGK/TIM	Isomerization	RHEA	34755880
MMDBr0013906	Mannitol 1-phosphate	beta-D-Fructose 6-phosphate	Mannitol-1-phosphate 5-dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0013908	Guanosine triphosphate	Guanosine diphosphate	GTPase ArgK	Dephosphorylation; Hydrolysis; Nucleic acid synthesis and/or repair	RHEA	34755880
MMDBr0013939	S-(Hydroxymethyl)glutathione	S-Formylglutathione	Alcohol dehydrogenase class-3	Dehydrogenation	RHEA	34755880
MMDBr0013940	S-(Hydroxymethyl)glutathione	S-Formylglutathione	Alcohol dehydrogenase class-3	Dehydrogenation	RHEA	34755880
MMDBr0013941	S-Methyl-5-thio-alpha-D-ribose 1-phosphate	5-Methylthioribulose 1-phosphate	5-deoxyribose 1-phosphate isomerase	Isomerization	RHEA	34755880
MMDBr0013983	propanoic acid	propanoyl-CoA	4-hydroxybutyrate--CoA ligase 1	Ligation	RHEA	34755880
MMDBr0013984	propanoic acid	propanoyl-CoA	Acyl-CoA ligase ppsA	Ligation	RHEA	34755880
MMDBr0013991	D-Xylitol	D-Xylulose	Sorbitol dehydrogenase	Dehydrogenation; Reduction	RHEA	34755880
MMDBr0013992	D-Xylitol	D-Xylulose	D-xylulose reductase A	Reduction	RHEA	34755880
MMDBr0014001	L-Kynurenine	L-3-Hydroxykynurenine	Kynurenine 3-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0014015	4-chlorophenylacetonitrile	4-chlorophenylacetic acid	Arylacetonitrilase	Amide hydrolysis	RHEA	34755880
MMDBr0014021	superoxide	Hydrogen peroxide	Methanobactin mb-OB3b	Dismutation	RHEA	34755880
MMDBr0014068	3-Dehydroquinate	3-Dehydroshikimic acid	Catabolic 3-dehydroquinase	Hydration/dehydration of C-O bond; Synthesis	RHEA	34755880
MMDBr0014083	Shikimate 3-phosphate	5-O-(1-Carboxyvinyl)-3-phosphoshikimate	Pentafunctional AROM polypeptide	Synthesis; Dehydration and isomerisation; Oxidation; Phosphorylation; Transfer of a carboxyvinyl group	RHEA	34755880
MMDBr0014109	2,3-Dihydroxybenzoate	Pyrocatechol	2,3-dihydroxybenzoate decarboxylase	Decarboxylation	RHEA	34755880
MMDBr0014160	3-deoxy-D-arabino-heptulosonate-7-phosphate	3-Dehydroquinate	Pentafunctional AROM polypeptide	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0014216	S-(Hydroxymethyl)glutathione	Formaldehyde	Putative glutathione-dependent formaldehyde-activating enzyme	Condensation	RHEA	34755880
MMDBr0014351	Glucose 1-phosphate	Alpha-D-glucose 6-phosphate	Phosphomannomutase/phosphoglucomutase	Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group	RHEA	34755880
MMDBr0014367	Adenine	Hypoxanthine	Adenine deaminase	Deamination	RHEA	34755880
MMDBr0014408	Fe(III)-heme b	heme b	Bifunctional cytochrome P450/NADPH--P450 reductase ALT2	Reduction	RHEA	34755880
MMDBr0014436	L-Glutamic acid	N-Acetylglutamic acid	Amino-acid acetyltransferase	Acetylation; Synthesis	RHEA	34755880
MMDBr0014507	ADP-D-ribose 1''-phosphate	ADP-D-ribose	ADP-ribose 1''-phosphate phosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014517	L-3-Hydroxykynurenine	3-Hydroxyanthranilic acid	Kynureninase	Cleavage of kynurenine	RHEA	34755880
MMDBr0014683	D-Xylitol	D-Xylose	Probable NAD(P)H-dependent D-xylose reductase xyl1	Reduction	RHEA	34755880
MMDBr0014684	D-Xylitol	D-Xylose	Probable NAD(P)H-dependent D-xylose reductase xyl1	Reduction	RHEA	34755880
MMDBr0014816	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014817	2'-Deoxyinosine triphosphate	DIMP	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014848	Xanthosine 5-triphosphate	Xanthylic acid	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014849	Xanthosine 5-triphosphate	Xanthylic acid	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014909	Inosine triphosphate	Inosinic acid	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0014910	Inosine triphosphate	Inosinic acid	Inosine triphosphate pyrophosphatase	Dephosphorylation	RHEA	34755880
MMDBr0015121	Lycopene	gamma-Carotene	Lycopene beta-cyclase	Cycle formation	RHEA	34755880
MMDBr0015129	gamma-Carotene	beta-Carotene	Lycopene beta-cyclase	Cycle formation	RHEA	34755880
MMDBr0015330	L-Dopa	Dopaquinone	Polyphenol oxidase 1	Oxidation	RHEA	34755880
MMDBr0015348	(2E,6E,10E)-geranylgeranyl diphosphate	15-cis-phytoene	Bifunctional protein CrtB/UppS	Cycle formation; Synthesis	RHEA	34755880
MMDBr0015792	Ornithine	N(5)-hydroxy-L-ornithine	L-ornithine N(5)-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0015793	Ornithine	N(5)-hydroxy-L-ornithine	L-ornithine N(5)-monooxygenase	Oxygenation	RHEA	34755880
MMDBr0016113	Acetamide	Acetic acid	Acetamidase	Amide hydrolysis	RHEA	34755880
MMDBr0017162	(R)-miconazole	(R)-miconazole	ABC multidrug transporter atrA	Transport	RHEA	34755880
MMDBr0017163	(R)-miconazole	(R)-miconazole	ABC multidrug transporter atrA	Transport	RHEA	34755880
MMDBr0017843	L-Glutamine	GMP	GMP synthase [glutamine-hydrolyzing]	Synthesis	RHEA	34755880
MMDBr0017874	L-Glutamine	L-Glutamic acid	Thermolabile glutaminase	Synthesis	RHEA	34755880
MMDBr0017881	L-Tyrosine	Dopaquinone	Polyphenol oxidase 1	Oxidation	RHEA	34755880
MMDBr0017882	Hydrogen carbonate	Carbamoylphosphate	Carbamoyl-phosphate synthase small chain	Synthesis	RHEA	34755880
MMDBr0024343	Adenosine triphosphate	Hydrogen Ion	Serine/threonine-protein kinase ssn3	Phosphorylation	RHEA	34755880
MMDBr0024346	NAD	Hydrogen Ion	Enoyl-[acyl-carrier-protein] reductase [NADH]	Reduction; Synthesis	RHEA	34755880
MMDBr0024370	S-Adenosylmethionine	S-Adenosylhomocysteine	Phosphatidylethanolamine N-methyltransferase	Methylation	RHEA	34755880
MMDBr0024484	beta-cyclopiazonate	alpha-cyclopiazonate	Beta-cyclopiazonate dehydrogenase	Dehydrogenation	RHEA	34755880
MMDBr0024539	Tetra-mu3-sulfido-tetrairon(2+)	5'-Deoxyadenosine	Lipoyl synthase	Synthesis	RHEA	34755880
MMDBr0024549	Myo-inositol hexakisphosphate	D-Myo-inositol 1,2,4,5,6-pentakisphosphate	3-phytase	Hydrolysis	RHEA	34755880
MMDBr0024553	FMNH2	Flavin mononucleotide	Bifunctional cytochrome P450/NADPH--P450 reductase 2	Reduction	RHEA	34755880
MMDBr0024563	NADP(+)	Hydrogen Ion	3-oxoacyl-[acyl-carrier-protein] reductase MabA	Reduction; Synthesis	RHEA	34755880
MMDBr0024568	L-Glutamine	L-Glutamic acid	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C	Amide group addition	RHEA	34755880
MMDBr0024586	L-Serine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0024701	Acetyl-CoA	Hydrogen Ion	Histone acetyltransferase rtt109	N-Acetylation	RHEA	34755880
MMDBr0024702	Acetyl-CoA	Hydrogen Ion	Histone acetyltransferase rtt109	N-Acetylation	RHEA	34755880
MMDBr0024720	Uridine diphosphate glucose	Uridine 5'-diphosphate	Sterol 3-beta-glucosyltransferase	Transfer of a glucosyl group	RHEA	34755880
MMDBr0024723	Malonyl-CoA	Water	Fatty acid synthase beta subunit pkiC	Synthesis	RHEA	34755880
MMDBr0024771	2-hydroxyisobutanoyl-CoA	Hydrogen Ion	tRNA(Met) cytidine acetyltransferase TmcA	N-Acetylation	RHEA	34755880
MMDBr0024772	2-hydroxyisobutanoyl-CoA	Hydrogen Ion	tRNA(Met) cytidine acetyltransferase TmcA	N-Acetylation	RHEA	34755880
MMDBr0024809	Cyclic pyranopterin monophosphate	Molybdopterin	Molybdopterin synthase catalytic subunit	Synthesis	RHEA	34755880
MMDBr0024964	L-Cysteine	CoA	Palmitoyltransferase pfa3	Transfer of a palmitoyl group	RHEA	34755880
MMDBr0024968	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA wybutosine-synthesizing protein 4	Synthesis	RHEA	34755880
MMDBr0024971	L-Threonylcarbamoyladenylate	Hydrogen Ion	tRNA N6-adenosine threonylcarbamoyltransferase	Synthesis	RHEA	34755880
MMDBr0024978	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA wybutosine-synthesizing protein 4	Synthesis	RHEA	34755880
MMDBr0025015	Acetyl-CoA	CoA	Fatty acid synthase beta subunit pkiC	Synthesis	RHEA	34755880
MMDBr0025016	Malonyl-CoA	CoA	Malonyl CoA-acyl carrier protein transacylase	Synthesis	RHEA	34755880
MMDBr0025065	molybdenum cofactor	L-Alanine	Molybdenum cofactor sulfurase	Sulfation of molybdenum	RHEA	34755880
MMDBr0025071	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (guanine-N(7)-)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025120	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (uracil-O(2)-)-methyltransferase	Methylation	RHEA	34755880
MMDBr0025127	S-Adenosylmethionine	S-Adenosylhomocysteine	tRNA (adenine(58)-N(1))-methyltransferase TrmI	Methylation	RHEA	34755880
MMDBr0025153	Hydrogen Ion	diphosphate	Molybdopterin-synthase adenylyltransferase	Synthesis	RHEA	34755880
MMDBr0025209	Acetyl-CoA	Hydrogen Ion	N-acetyltransferase Eis	Acetylation	RHEA	34755880
MMDBr0025210	Acetyl-CoA	Hydrogen Ion	Histone acetyltransferase rtt109	N-Acetylation	RHEA	34755880
MMDBr0025237	L-Threonine	Hydrogen Ion	Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein	Phosphorylation; Synthesis	RHEA	34755880
MMDBr0025305	NADP(+)	Hydrogen Ion	Very-long-chain 3-oxoacyl-CoA reductase	Reduction	RHEA	34755880
MMDBr0025452	NADP(+)	Uridine 5'-monophosphate	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]	Synthesis	RHEA	34755880
MMDBr0025453	Uridine 5'-monophosphate	NADP(+)	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]	Synthesis	RHEA	34755880
MMDBr0025454	NAD	Uridine 5'-monophosphate	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]	Synthesis	RHEA	34755880
MMDBr0025455	Uridine 5'-monophosphate	NAD	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]	Synthesis	RHEA	34755880
MMDBr0025470	Crotonoyl-CoA	Hydrogen Ion	Histone acetyltransferase esa1	N-Acetylation	RHEA	34755880
MMDBr0025471	Crotonoyl-CoA	Hydrogen Ion	Histone acetyltransferase esa1	N-Acetylation	RHEA	34755880
MMDBr0025573	L-Cysteine	Niacinamide	Thiamine thiazole synthase	Synthesis	RHEA	34755880
MMDBr0025719	S-Adenosylmethionine	S-Adenosylhomocysteine	Histone-lysine N-methyltransferase, H3 lysine-4 specific	Methylation	RHEA	34755880
MMDBr0025726	S-Adenosylmethionine	S-Adenosylhomocysteine	Histone-lysine N-methyltransferase, H3 lysine-36 specific	Methylation	RHEA	34755880
MMDBr0025727	S-Adenosylmethionine	S-Adenosylhomocysteine	Histone-lysine N-methyltransferase, H3 lysine-79 specific	Methylation	RHEA	34755880
MMDBr0025730	L-Methionine	S-Adenosylhomocysteine	Secondary metabolism regulator LAE1	Methylation	RHEA	34755880
MMDBr0025731	L-Methionine	S-Adenosylhomocysteine	Secondary metabolism regulator LAE1	Methylation	RHEA	34755880
MMDBr0025851	S-Adenosylmethionine	S-Adenosylhomocysteine	Histone-lysine N-methyltransferase set9	Methylation	RHEA	34755880
MMDBr0025945	S-Adenosylmethionine	S-Adenosylhomocysteine	mRNA cap guanine-N7 methyltransferase	Methylation	RHEA	34755880
MMDBr0026065	Cytidine triphosphate	Cytidine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026066	Uridine triphosphate	Uridine 5'-monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026067	Adenosine triphosphate	Adenosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026068	Guanosine triphosphate	Guanosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026069	Cytidine triphosphate	Cytidine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026070	Uridine triphosphate	Uridine 5'-monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026071	Adenosine triphosphate	Adenosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026072	Guanosine triphosphate	Guanosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026089	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026090	Deoxycytidine 5'-triphosphate	2'-Deoxycytidine 5'-phosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026091	Deoxyadenosine triphosphate	Deoxyadenosine monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026092	2'-Deoxyguanosine 5'-triphosphate	2'-Deoxyguanosine 5'-monophosphate	Nucleoside triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation	RHEA	34755880
MMDBr0026093	Deoxyuridine triphosphate	2'-Deoxyuridine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026094	Deoxycytidine 5'-triphosphate	2'-Deoxycytidine 5'-phosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026095	Deoxyadenosine triphosphate	Deoxyadenosine monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880
MMDBr0026096	2'-Deoxyguanosine 5'-triphosphate	2'-Deoxyguanosine 5'-monophosphate	Inosine triphosphate pyrophosphatase	Purine metabolism and pyrimidine metabolism	RHEA	34755880

Genome Data

Genome Link

MMDBm0028980

Genome Length

6613413 bp

# Predicted Proteins

2103

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-12-09 02:04:07 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_036435