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Browsing Reactions
Reactions for
Oligotropha carboxidovorans OM5 [MMDBm0002329]
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Reaction type:
All
2-Thiolation of uridine
5S, 16S and 23S rRNA 5'-end maturation; Dephosphorylation
ATP hydrolysis
Acetylation
Acylation
Addition of alanine
Addition of fucose in alpha 1-3 linkage
Aerobic and anaerobic degradation of long-chain fatty acids
Aldol addition (or reverse)
Amide group addition
Amide hydrolysis
Amine group addition
Arginine ADP-riboxanation
Bond cleavage
Carbohydrate hydrolysis
Carbon-nitrogen bond hydrolysis
Carbonate dehydration (or hydration of CO2)
Carbon–carbon-bond formation
Carboxylation
Carboxylic ester bond hydrolysis
Chelation
Cleavage of GlcNAc linked beta-1,4 to MurNAc tripeptides
Cleavage of kynurenine
Conjugation of reduced glutathione
Conversion of beta-carotene to canthaxanthin via echinenone
Cross-linking of proteins and the conjugation of polyamines to proteins
Cycle formation
Deacetylation
Deacylation
Deamidation
Deamination
Dehalogenation
Dehydrogenation
Dehydrogenation; Isomerization
Dehydrogenation; Phosphorylation
Dehydrogenation; Redox reaction
Dehydrogenation; Redox reaction; Reduction
Dehydrogenation; Reduction
Dehydrogenation; Synthesis
Demethylation
Dephosphorylation
Desaturation
Desulfuration
Dismutation
Electron transfer
Enolization
Epimerization
Farnesylation
Fatty acid elongation
Formation of 2'-nucleotide products from 2',3'-cyclic substrates
Formation of putrescine from agmatine
Glycan chain elongation
Glycogen synthesis
Glycosidic bond hydrolysis
Glycosylation
Hydration/dehydration of C-O bond
Hydrogenation
Hydrolysis
Hydrolysis of a nucleotide
Hydrolysis of an ester group
Hydrolysis of arginine
Hydrolysis of bond
Hydrolysis of bond; Hydrolysis of nucleotide
Hydrolysis of bond; Synthesis
Hydrolysis of carbon-nitrogen bond
Hydrolysis of nucleotide
Hydrolysis of nucleotide; Dephosphorylation
Hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates
Hydrolysis; Ligation
Hydrolysis; Ligation; Synthesis
Hydrolytic deamination
Hydroxylation
Hydroxylation; Oxygenation
Incorporation of amino acid(s)
Insertion of molybdate into adenylated molybdopterin
Interconversion of 2-phosphoglycerate (2-PGA) and 3-phosphoglycerate (3-PGA)
Interconversion of 2-phosphoglycerate and 3-phosphoglycerate
Interconversion of succinyl-CoA and methylmalonyl-CoA
Intramolecular transfer of functional group
Isomerization
Ligation
Ligation; Phosphorylation
Ligation; Reduction
Ligation; Synthesis
Lipid (ester bond) hydrolysis
Lipid (ester bond) hydrolysis; Reduction
Membrane transport of molecule
Methylation
Methylation; Phosphorylation
Methylthiolation
Mutarotation
N-Acetylation
N-linked glycosylation
Nitrogen fixation
Non-hydrolytic bond cleavage
Non-hydrolytic bond cleavage (or its reversal)
Nucleic acid synthesis and/or repair
Nucleotidylation
Oxidation
Oxidative decarboxylation
Oxidative demethylation
Oxidoreduction
Oxygenation
Peptide hydrolysis
Phosphorylation
Phosphorylation; Synthesis
Purine metabolism and pyrimidine metabolism
Purine metabolism and pyrimidine metabolism; Hydrolysis of pyrophosphate; Dephosphorylation
RNA degradation
Racemization
Redox reaction
Redox reaction; Synthesis
Reduction
Reduction; Synthesis
Removal of the N-terminal formyl group
Reversible hydrolysis
Reversible transfer of an adenylyl group
Stereospecific hydrolysis
Sulfation of molybdenum
Sulfuration
Synthesis
Synthesis and repair of 3'-terminal CCA sequence of tRNA
Synthesis of alpha-glucan from sucrose
Synthesis; Reverse C-prenylation of phenalenone; Transfer of a prenyl group
Synthesis; Transfer of phosphoribosyl group
Thiamine biosynthesis
Transfer of 3-deoxy-D-manno-octulosonic acid
Transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate
Transfer of CDP-diacylglycerol--inositol 3-phosphatidyl group
Transfer of CDP-diacylglycerol--serine O-phosphatidyl group
Transfer of CoA moiety
Transfer of Homoserine O-succinyl group
Transfer of Kdo(2)-lipid A phosphoethanolamine
Transfer of L-seryl-tRNA(Sec) selenium
Transfer of N-acetylglucosamine
Transfer of O-phosphoseryl-tRNA(Sec) selenium
Transfer of TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyl group
Transfer of UDP-N-acetyl-D-mannosaminuronic acid
Transfer of UDP-N-acetylglucosamine
Transfer of UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine
Transfer of a GMP
Transfer of a L-cysteine S-thiosulfo group
Transfer of a ML-236A carboxylate methylbutanoyl group
Transfer of a N-acetyllactosaminide alpha-2,3-sialyl group
Transfer of a carbamoyl group
Transfer of a cytidylyl group
Transfer of a dimethylallyl group
Transfer of a fatty acid residue
Transfer of a formyl group
Transfer of a galactosyl group
Transfer of a glucosyl group
Transfer of a glucuronosyl group
Transfer of a glycosyl group
Transfer of a mannosyl group
Transfer of a octanoyl group
Transfer of a palmitoyl group
Transfer of a poly(ribitol-phosphate) alpha-N-acetylglucosaminyl groip
Transfer of a poly(ribitol-phosphate) beta-N-acetylglucosaminyl group
Transfer of a rhamnosyl group
Transfer of a ribosyl group
Transfer of a single N-acetylglucosamine
Transfer of a tRNA-uridine aminocarboxypropyl group
Transfer of adenosine
Transfer of amino group
Transfer of an alpha-1,4-glucan:maltose-1-phosphate maltosyl group
Transfer of an aminocarboxypropyl group
Transfer of an uridylyl group
Transfer of auccinyl-CoA:3-ketoacid coenzyme A
Transfer of electrons from cytoplasmic thioredoxin to the periplasm
Transfer of glycylpeptide N-tetradecanoyl group
Transfer of ions/molecules across membranes
Transfer of ketol group
Transfer of phosphate group
Transfer of phosphate groups within a molecule
Transfer of phospho-N-acetylmuramoyl-pentapeptide
Transfer of phosphocholine
Transfer of phosphoribosyl-dephospho-CoA
Transfer of propionyl-CoA:succinate CoA
Transfer of ribazole
Transfer of succinyl moiety
Transfer of the FMN moiety of FAD
Transfer of the GlcNAc-1-phosphate moiety
Transfer of the L-Ara4N moiety
Transfer of the diacylglyceryl group
Transfer of the methylene group to tetrahydrofolate
Transfers a segment of a (1->4)-alpha-D-glucan
Transfers of a phosphate group; Isomerization
Transfers of a phosphate group; Isomerization; Intramolecular transfer of functional group
Transfers of an adenosyl group
Transport
Trransfer of a N-acetylglucosaminyl group
conjugation; phase-II biotransformation; glucuronide-conjugation
multistep reaction by bacteria
oxidation
Subsystem:
All
Miscellaneous
Transport, extracellular
In organism:
All
Human
Microbial
Strain:
All
Oligotropha carboxidovorans OM5
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Displaying reactions
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51
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Reaction ID
Precursor
Product
Enzyme
Reaction Type
Sub-System
In Non-microbes
In Microbes
Data Sources
MMDBr0024389
L-Leucine
diphosphate
Leucine--tRNA ligase
Ligation
Not Available
0
753
RHEA
MMDBr0024401
L-Serine
Adenosine 3',5'-diphosphate
Holo-[acyl-carrier-protein] synthase
Dehydrogenation; Synthesis
Not Available
0
588
RHEA
MMDBr0024411
L-Serine
Hydrogen Ion
Type-2 serine--tRNA ligase
Ligation
Not Available
0
802
RHEA
MMDBr0024424
S-Adenosylmethionine
S-Adenosylhomocysteine
Protein-L-isoaspartate O-methyltransferase
Methylation
Not Available
0
317
RHEA
MMDBr0024474
L-Proline
diphosphate
Proline--tRNA ligase
Ligation
Not Available
0
828
RHEA
MMDBr0024483
L-Glutamine
L-Glutamic acid
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
Amide group addition
Not Available
0
1045
RHEA
MMDBr0024522
Glycine
diphosphate
Glycine--tRNA ligase
Ligation
Not Available
0
849
RHEA
MMDBr0024539
Tetra-mu3-sulfido-tetrairon(2+)
5'-Deoxyadenosine
Lipoyl synthase
Synthesis
Not Available
0
579
RHEA
MMDBr0024568
L-Glutamine
L-Glutamic acid
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
Amide group addition
Not Available
0
1779
RHEA
MMDBr0024578
Adenosine triphosphate
diphosphate
Cysteine--tRNA ligase
Ligation
Not Available
0
720
RHEA
MMDBr0024590
Adenosine triphosphate
ADP
Nucleoside diphosphate kinase
Phosphorylation
Not Available
0
663
RHEA
MMDBr0024597
L-Aspartic acid
diphosphate
Aspartate--tRNA(Asp/Asn) ligase
Ligation
Not Available
0
437
RHEA
MMDBr0024628
L-Phenylalanine
Hydrogen Ion
Phenylalanine--tRNA ligase beta subunit
Ligation
Not Available
0
978
RHEA
MMDBr0024630
S-Adenosylmethionine
S-Adenosylhomocysteine
Ribosomal RNA small subunit methyltransferase A
Methylation
Not Available
0
624
RHEA
MMDBr0024707
di-mu-Sulfido-diiron(1+)
5'-Deoxyadenosine
Biotin synthase
Synthesis
Not Available
0
592
RHEA
MMDBr0024745
L-Glutamic acid
diphosphate
Glutamate--tRNA ligase
Ligation
Not Available
0
871
RHEA
MMDBr0024778
(6S)-10-formyltetrahydrofolic acid
(6S)-5,6,7,8-tetrahydrofolic acid
Methionyl-tRNA formyltransferase
Transfer of a formyl group
Not Available
0
686
RHEA
MMDBr0024779
N-Formyl-L-methionine
formate
Peptide deformylase 1
Removal of the N-terminal formyl group
Not Available
0
464
RHEA
MMDBr0024813
Dimethylallylpyrophosphate
diphosphate
tRNA dimethylallyltransferase
Transfer of a dimethylallyl group
Not Available
0
788
RHEA
MMDBr0024883
S-Adenosylmethionine
Adenine
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Isomerization
Not Available
0
536
RHEA
MMDBr0024971
L-Threonylcarbamoyladenylate
Hydrogen Ion
tRNA N6-adenosine threonylcarbamoyltransferase
Synthesis
Not Available
0
755
RHEA
MMDBr0024974
S-Adenosylmethionine
5'-Deoxyadenosine
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Synthesis
Not Available
0
610
RHEA
MMDBr0024977
S-Adenosylmethionine
5'-Deoxyadenosine
Ribosomal protein S12 methylthiotransferase RimO
Methylthiolation
Not Available
0
412
RHEA
MMDBr0025060
L-Serine
Hydrogen Ion
Type-2 serine--tRNA ligase
Ligation
Not Available
0
802
RHEA
MMDBr0025075
S-Adenosylmethionine
S-Adenosylhomocysteine
Ribosomal RNA large subunit methyltransferase E
Methylation
Not Available
0
407
RHEA
Displaying reactions
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51
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