| MMDBm0802249 | Anaerostipes caccae | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802250 | Anaerostipes hadrus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000021 | Anaerostipes caccae | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0533412 | Citrobacter amalonaticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000105 | Citrobacter freundii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0533435 | Citrobacter freundii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0533439 | Citrobacter portucalensis | Eubacteria | Proteobacteria | |
| MMDBm0802145 | Ruminiclostridium cellobioparum | Eubacteria | Firmicutes | |
| MMDBm0000793 | Peptacetobacter hiranonis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802992 | Lacrimispora indolis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0808650 | Clostridium innocuum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802894 | Clostridium methoxybenzovorans | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0800387 | Clostridium sp. SS2/1 | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802901 | Clostridium symbiosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802902 | Clostridium symbiosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802903 | Clostridium symbiosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0786739 | Enterococcus avium | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000688 | Enterococcus saccharolyticus | Eubacteria | Firmicutes | |
| MMDBm0808881 | Erysipelotrichaceae bacterium 3_1_53 | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0540120 | Escherichia albertii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0540122 | Escherichia albertii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001584 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001596 | Escherichia fergusonii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000160 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000172 | Eubacterium limosum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0801634 | Eubacterium ramulus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805490 | Faecalibacterium prausnitzii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0544527 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0544444 | Klebsiella michiganensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0544716 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001067 | Klebsiella variicola | Eubacteria | Proteobacteria | |
| MMDBm0001156 | Lachnospiraceae bacterium 5_1_63FAA | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001748 | Lactobacillus casei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790338 | Lacticaseibacillus rhamnosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002107 | Megasphaera elsdenii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0723994 | Olsenella profusa | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0801900 | Pseudoramibacter alactolyticus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0547370 | Raoultella planticola | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002232 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000269 | Candidatus Stoquefichus massiliensis | Eubacteria | Firmicutes | |
| MMDBm0002632 | Streptococcus parauberis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0808723 | Faecalicoccus pleomorphus | Eubacteria | Firmicutes | Obligate anaerobe |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562438 | Yersinia frederiksenii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562450 | Yersinia kristensenii | Eubacteria | Proteobacteria | Aerobe |