Carboxylation

Reaction Identification
Reaction IDMMDBr0014295
Reaction typeCarboxylation
Sub-SystemNot Available
In non-microbes0
In microbes146
Data SourcesRHEA;
Metabolism
PrecursorReactionProduct
(2R)-3-phosphoglyceric acid

Ribulose bisphosphate carboxylase large chain

Carboxylation

D-Ribulose 1,5-bisphosphate
Microbe IDOrganismKindgomPhylumOxygen preference
MMDBm0001162Acaryochloris marinaEubacteriaCyanobacteriaAerobe
MMDBm0002329Oligotropha carboxidovoransEubacteriaProteobacteriaAerobe
MMDBm0001212Alkalilimnicola ehrlichiiEubacteriaProteobacteriaFacultative anaerobe
MMDBm0631444EubacteriaProteobacteria
MMDBm0001953Archaeoglobus fulgidusArchaeaEuryarchaeotaAnaerobe
MMDBm0420899Aurantimonas manganoxydansEubacteriaProteobacteria
MMDBm0001308Bradyrhizobium japonicumEubacteriaProteobacteriaAerobe
MMDBm0002439Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001509Cyanothece sp. ATCC 51142EubacteriaCyanobacteriaFacultative
MMDBm0001507Cupriavidus taiwanensisEubacteriaProteobacteriaFacultative
MMDBm0001512Cyanothece sp. PCC 7425EubacteriaCyanobacteriaFacultative
MMDBm0001652Gloeobacter violaceusEubacteriaCyanobacteria
MMDBm0495533Hydrogenophaga pseudoflavaEubacteriaProteobacteria
MMDBm0635800Hydrogenophilus thermoluteolusEubacteriaProteobacteria
MMDBm0001843Methanosarcina acetivoransArchaeaEuryarchaeotaAnaerobe
MMDBm0001845Methanosarcina barkeriArchaeaEuryarchaeotaAnaerobe
MMDBm0001865Methylococcus capsulatusEubacteriaProteobacteriaAerobe
MMDBm0002001Methylacidiphilum infernorumEubacteriaVerrucomicrobiaAerobe
MMDBm0001818Methanocaldococcus jannaschiiArchaeaEuryarchaeotaAnaerobe
MMDBm0001844Methanosarcina mazeiArchaeaEuryarchaeotaAnaerobe
MMDBm0001873Microcystis aeruginosaEubacteriaCyanobacteriaAerobe
MMDBm0001977Nitrosomonas europaeaEubacteriaProteobacteriaAerobe
MMDBm0001949Nitrosospira multiformisEubacteriaProteobacteriaAerobe
MMDBm0001942Nitrosococcus oceaniEubacteriaProteobacteriaAerobe
MMDBm0505045Nitrosomonas sp. ENI-11EubacteriaProteobacteria
MMDBm0505212Nitrosospira sp. 40KIEubacteriaProteobacteria
MMDBm0505286Nitrosospira sp. TCH716EubacteriaProteobacteria
MMDBm0432267Nitrobacter vulgarisEubacteriaProteobacteria
MMDBm0432268Nitrobacter winogradskyiEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001960Nostoc punctiformeEubacteriaCyanobacteriaAerobe
MMDBm0002659Synechococcus sp. WH 8102EubacteriaCyanobacteriaFacultative
MMDBm0001347Burkholderia phymatumEubacteriaProteobacteriaFacultative aerobe
MMDBm0001334Burkholderia xenovoransEubacteriaProteobacteriaAerobe
MMDBm0881987Prochlorothrix hollandicaEubacteria
MMDBm0002378Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002381Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002379Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002382Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002377Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002375Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002371Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002372Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002373Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002376Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002374Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0002413Pseudonocardia dioxanivoransEubacteriaActinobacteriaAerobic
MMDBm0002423Pyrococcus abyssiArchaeaEuryarchaeotaAnaerobe
MMDBm0002425Pyrococcus furiosusArchaeaEuryarchaeotaAnaerobe
MMDBm0002424Pyrococcus horikoshiiArchaeaEuryarchaeotaAnaerobe
MMDBm0002450Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002453Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002451Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002454Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002440Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002442Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0631551Solemya velum gill symbiontEubacteriaProteobacteria
MMDBm0002663Synechococcus elongatusEubacteriaCyanobacteriaFacultative
MMDBm0002667Synechococcus sp. RCC307EubacteriaCyanobacteriaFacultative
MMDBm0002665Synechococcus sp. CC9311EubacteriaCyanobacteriaFacultative
MMDBm0002661Synechococcus sp. CC9902EubacteriaCyanobacteriaFacultative
MMDBm0002662Synechococcus sp. CC9605EubacteriaCyanobacteriaFacultative
MMDBm0881978Synechococcus sp.Eubacteria
MMDBm0002690Thermococcus kodakarensisArchaeaEuryarchaeotaAnaerobe
MMDBm0002691Thermococcus onnurineusArchaeaEuryarchaeotaAnaerobe
MMDBm0002730Trichodesmium erythraeumEubacteriaCyanobacteriaAerobe
MMDBm0451584Xanthobacter flavusEubacteriaProteobacteria
MMDBm0002760Xanthobacter autotrophicusEubacteriaProteobacteriaAerobe
MMDBm0002441Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0456231Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001684Halothiobacillus neapolitanusEubacteriaProteobacteriaAerobic
MMDBm0002538Sinorhizobium melilotiEubacteriaProteobacteriaAerobe
MMDBm0002141Rhodobacter capsulatusEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002449Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002539Sinorhizobium medicaeEubacteriaProteobacteriaAerobe
MMDBm0002719Thiobacillus denitrificansEubacteriaProteobacteriaAerobe
MMDBm0002721Thiomonas intermediaEubacteriaProteobacteriaAerobic
MMDBm0001172Acidithiobacillus ferrooxidansEubacteriaProteobacteriaFacultative
MMDBm0000401Acidithiobacillus ferrooxidansEubacteriaProteobacteriaAerobe
MMDBm0001215Allochromatium vinosumEubacteriaProteobacteriaFacultative
MMDBm0001310Bradyrhizobium sp. BTAi1EubacteriaProteobacteriaAerobe
MMDBm0001309Bradyrhizobium sp. ORS278EubacteriaProteobacteriaAerobe
MMDBm0002720Thiomicrospira crunogena EubacteriaProteobacteriaMicroaerophilic
MMDBm0608688Hydrogenovibrio marinusEubacteriaProteobacteria
MMDBm0001854Methylibium petroleiphilumEubacteriaProteobacteriaFacultative aerobe
MMDBm0001941Nitrobacter hamburgensisEubacteriaProteobacteriaAerobe
MMDBm0001940Nitrobacter winogradskyiEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002452Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001172Acidithiobacillus ferrooxidansEubacteriaProteobacteriaFacultative
MMDBm0000401Acidithiobacillus ferrooxidansEubacteriaProteobacteriaAerobe
MMDBm0001215Allochromatium vinosumEubacteriaProteobacteriaFacultative
MMDBm0001309Bradyrhizobium sp. ORS278EubacteriaProteobacteriaAerobe
MMDBm0002720Thiomicrospira crunogena EubacteriaProteobacteriaMicroaerophilic
MMDBm0608688Hydrogenovibrio marinusEubacteriaProteobacteria
MMDBm0001854Methylibium petroleiphilumEubacteriaProteobacteriaFacultative aerobe
MMDBm0001941Nitrobacter hamburgensisEubacteriaProteobacteriaAerobe
MMDBm0001940Nitrobacter winogradskyiEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002452Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001310Bradyrhizobium sp. BTAi1EubacteriaProteobacteriaAerobe
MMDBm0490639Cupriavidus necatorEubacteriaProteobacteria
MMDBm0001504Ralstonia eutrophaEubacteriaProteobacteriaFacultative aerobe
MMDBm0001941Nitrobacter hamburgensisEubacteriaProteobacteriaAerobe
MMDBm0001504Ralstonia eutrophaEubacteriaProteobacteriaFacultative aerobe
MMDBm0002439Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002441Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0456231Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001517Dechloromonas aromaticaEubacteriaProteobacteriaFacultative
MMDBm0001684Halothiobacillus neapolitanusEubacteriaProteobacteriaAerobic
MMDBm0002720Thiomicrospira crunogena EubacteriaProteobacteriaMicroaerophilic
MMDBm0608688Hydrogenovibrio marinusEubacteriaProteobacteria
MMDBm0462915Magnetospirillum magnetotacticumEubacteriaProteobacteria
MMDBm0001796Magnetospirillum magneticumEubacteriaProteobacteriaMicroaerophilic
MMDBm0002366Polaromonas naphthalenivoransEubacteriaProteobacteriaAerobe
MMDBm0000411Rhodobacter capsulatusEubacteriaProteobacteria
MMDBm0002141Rhodobacter capsulatusEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0001204Rhodoferax ferrireducensEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002450Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002453Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002449Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002451Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002452Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002454Rhodopseudomonas palustrisEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002456Rhodospirillum rubrumEubacteriaProteobacteriaFacultative anaerobe
MMDBm0000413Rhodospirillum rubrumEubacteriaProteobacteriaFacultative anaerobe
MMDBm0002440Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002442Rhodobacter sphaeroidesEubacteriaProteobacteriaAerobe; anaerobe
MMDBm0002719Thiobacillus denitrificansEubacteriaProteobacteriaAerobe
MMDBm0002721Thiomonas intermediaEubacteriaProteobacteriaAerobic
MMDBm0002342Paracoccus denitrificansEubacteriaProteobacteriaAerobe
MMDBm0001680Halorhodospira halophilaEubacteriaProteobacteriaAnaerobe
MMDBm0002380Prochlorococcus marinusEubacteriaCyanobacteria
MMDBm0001310Bradyrhizobium sp. BTAi1EubacteriaProteobacteriaAerobe
MMDBm0001170Acidiphilium cryptumEubacteriaProteobacteriaAerobe
MMDBm0001511Cyanothece sp. PCC 7424EubacteriaCyanobacteriaFacultative
MMDBm0002246Thioalkalivibrio sp. HL-EbGR7EubacteriaProteobacteria
MMDBm0002735Variovorax paradoxus EubacteriaProteobacteriaAerobe
MMDBm0001959Nostoc sp. PCC 7120EubacteriaCyanobacteriaAerobe
MMDBm0002660Synechococcus elongatusEubacteriaCyanobacteriaAerobe
MMDBm0882069Synechocystis sp. PCC 6803Eubacteria
MMDBm0002666Synechococcus sp. WH 7803EubacteriaCyanobacteriaFacultative
MMDBm0001945Nitrosomonas eutrophaEubacteriaProteobacteriaAerobe
MMDBm0001506Cupriavidus metalliduransEubacteriaProteobacteriaFacultative
MMDBm0001989Synechococcus sp. JA-2-3B'a(2-13)EubacteriaCyanobacteriaFacultative
MMDBm0002664Synechococcus sp. JA-3-3AbEubacteriaCyanobacteriaFacultative
MMDBm0001220Anabaena variabilisEubacteriaCyanobacteriaAerobe
MMDBm0002668Synechococcus sp. PCC 7002EubacteriaCyanobacteriaFacultative
MMDBm0002709Thermosynechococcus elongatusEubacteriaCyanobacteria