| MMDBm0785760 | Aerococcus viridans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0802249 | Anaerostipes caccae | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000021 | Anaerostipes caccae | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0766846 | Aneurinibacillus aneurinilyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000024 | Bacillus altitudinis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001274 | amyloliquefaciens | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000025 | Bacillus amyloliquefaciens | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730668 | Bacillus atrophaeus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001257 | Bacillus clausii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0730439 | Bacillus endophyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001255 | Bacillus licheniformis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0730692 | Bacillus mojavensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730563 | Bacillus pumilus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0730698 | Bacillus sonorensis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0000033 | Bacillus vallismortis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0648166 | Bifidobacterium scardovii | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0766910 | Brevibacillus agri | Eubacteria | Firmicutes | Aerobe |
| MMDBm0766911 | Brevibacillus agri | Eubacteria | Firmicutes | Aerobe |
| MMDBm0514216 | Campylobacter rectus | Eubacteria | Proteobacteria | Microaerophile |
| MMDBm0533363 | Cedecea davisae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0533412 | Citrobacter amalonaticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000105 | Citrobacter freundii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0533435 | Citrobacter freundii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001450 | Citrobacter koseri | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0533439 | Citrobacter portucalensis | Eubacteria | Proteobacteria | |
| MMDBm0533444 | Citrobacter youngae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000114 | acetobutylicum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0802145 | Ruminiclostridium cellobioparum | Eubacteria | Firmicutes | |
| MMDBm0806095 | Clostridium viride | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0557462 | Edwardsiella tarda | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002181 | Edwardsiella tarda | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000150 | Eggerthella lenta | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0724384 | Eggerthella sp. 1_3_56FAA | Eubacteria | Actinobacteria | Nanaerobe |
| MMDBm0000151 | Eggerthella sp. YY7918 | Eubacteria | Actinobacteria | Nanaerobe |
| MMDBm0553036 | Enterobacteriaceae bacterium 9_2_54FAA | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0786738 | Enterococcus asini | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786739 | Enterococcus avium | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786742 | Enterococcus caccae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786748 | Enterococcus casseliflavus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786759 | Enterococcus dispar | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0786760 | Enterococcus durans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002278 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787115 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787127 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787132 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001575 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787486 | Enterococcus faecium | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787501 | Enterococcus gallinarum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0787536 | Enterococcus phoeniculicola | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000153 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0540120 | Escherichia albertii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0540122 | Escherichia albertii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001584 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001593 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001583 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001596 | Escherichia fergusonii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0543470 | Escherichia sp. 1_1_43 | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000160 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0543506 | Escherichia sp. 4_1_40B | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0761343 | Geobacillus stearothermophilus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0761370 | Geobacillus vulcani | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001132 | Gordonibacter pamelaeae | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0557502 | Hafnia alvei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0808755 | Holdemania filiformis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001740 | brevis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001741 | Lactobacillus casei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001748 | Lactobacillus casei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792831 | Lactobacillus coryniformis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792594 | Latilactobacillus curvatus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0792746 | Lactobacillus mucosae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790274 | Lacticaseibacillus paracasei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790275 | Lacticaseibacillus paracasei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790389 | Lactiplantibacillus pentosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001751 | Lactiplantibacillus plantarum | Eubacteria | Firmicutes | Microaerophilic |
| MMDBm0790394 | Lactiplantibacillus plantarum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001734 | Lactiplantibacillus plantarum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001752 | Lactobacillus rhamnosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0790338 | Lacticaseibacillus rhamnosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001738 | Lactobacillus sakei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0533093 | Leminorella grimontii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0766514 | Listeria grayi | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766676 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001784 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766572 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766585 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766588 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766709 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766729 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766731 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0766734 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002330 | Olsenella uli | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000226 | Paenibacillus alvei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0767965 | Paenibacillus lactis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0792853 | Pediococcus acidilactici | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0792856 | Pediococcus acidilactici | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002349 | Pediococcus pentosaceus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0810478 | Peptoniphilus harei | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0810479 | Peptoniphilus indolicus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0810484 | Peptoniphilus lacrimalis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0810498 | Peptoniphilus timonensis | Eubacteria | Firmicutes | |
| MMDBm0805074 | Peptostreptococcus anaerobius | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0805078 | Peptostreptococcus stomatis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002385 | freudenreichii | Eubacteria | Actinobacteria | Facultative |
| MMDBm0558116 | Proteus mirabilis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0558122 | Proteus penneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0558544 | Providencia rettgeri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002232 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0774772 | Staphylococcus arlettae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002566 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000633 | Staphylococcus capitis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779391 | Staphylococcus capitis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779389 | Staphylococcus capitis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002562 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779527 | Staphylococcus equorum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002563 | Staphylococcus haemolyticus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779540 | Staphylococcus hominis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002575 | Staphylococcus lugdunensis | Eubacteria | Firmicutes | Aerobe; anaerobe |
| MMDBm0779566 | Staphylococcus pasteuri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779569 | Staphylococcus pettenkoferi | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002564 | Staphylococcus saprophyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0774625 | Mammaliicoccus sciuri | Eubacteria | Firmicutes | |
| MMDBm0779587 | Staphylococcus simulans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0774633 | Mammaliicoccus vitulinus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779599 | Staphylococcus warneri | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779602 | Staphylococcus xylosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0779603 | Staphylococcus xylosus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002597 | Streptococcus agalactiae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0794617 | Streptococcus mutans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0796207 | Streptococcus thoraltensis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0552432 | Yokenella regensburgei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0393956 | Prevotella enoeca | Eubacteria | Bacteroidetes | Anaerobe |