| MMDBm0001183 | Acinetobacter sp. ADP1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001200 | Agrobacterium tumefaciens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001205 | Alcanivorax borkumensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001209 | Vibrio fischeri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001212 | Alkalilimnicola ehrlichii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000028 | Bacillus halodurans | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001222 | Anaeromyxobacter dehalogenans | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0001227 | Anaplasma phagocytophilum | Eubacteria | Proteobacteria | Aerobic |
| MMDBm0001236 | Aromatoleum aromaticum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001988 | Aster yellows witches'-broom phytoplasma | Eubacteria | Tenericutes | Aerobe |
| MMDBm0000460 | Bacillus anthracis | Eubacteria | Firmicutes | |
| MMDBm0001249 | Bacillus cereus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001252 | Bacillus cereus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001256 | Bacillus cereus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0000046 | Bacteroides fragilis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000047 | Bacteroides fragilis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0001254 | Bacillus thuringiensis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001255 | Bacillus licheniformis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001257 | Bacillus clausii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0000055 | thetaiotaomicron | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0001984 | Bartonella henselae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001279 | Bartonella quintana | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001990 | Baumannia cicadellinicola | Eubacteria | Proteobacteria | |
| MMDBm0001981 | Bdellovibrio bacteriovorus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000076 | Bifidobacterium longum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001378 | Candidatus Blochmannia floridanus | Eubacteria | Proteobacteria | |
| MMDBm0001379 | Candidatus Blochmannia pennsylvanicus | Eubacteria | Proteobacteria | |
| MMDBm0001294 | avium | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001964 | Bordetella bronchiseptica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001965 | Bordetella parapertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001966 | Bordetella pertussis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001308 | Bradyrhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001315 | Brucella abortus | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001314 | Brucella abortus | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001312 | Brucella melitensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001313 | Brucella suis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001322 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001323 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001324 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001335 | Burkholderia cenocepacia | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001332 | Burkholderia sp. 383 | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001329 | Burkholderia mallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001331 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001330 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001333 | Burkholderia thailandensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001358 | Thermoanaerobacter tengcongensis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001367 | Campylobacter jejuni | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001971 | Campylobacter jejuni | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001406 | Carboxydothermus hydrogenoformans | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001409 | Caulobacter crescentus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002439 | Rhodobacter sphaeroides | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0001420 | Chelativorans sp. BNC1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001433 | Chlamydophila abortus | Eubacteria | Chlamydiae | |
| MMDBm0001440 | Chlorobium chlorochromatii | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001432 | Chlamydophila caviae | Eubacteria | Chlamydiae | |
| MMDBm0001435 | Chlamydophila felis | Eubacteria | Chlamydiae | |
| MMDBm0002354 | Chlorobium luteolum | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001423 | Chlamydia muridarum | Eubacteria | Chlamydiae | |
| MMDBm0637965 | Chlamydia pneumoniae | Eubacteria | Chlamydiae | |
| MMDBm0001424 | Chlamydia trachomatis | Eubacteria | Chlamydiae | |
| MMDBm0001438 | Chlorobium tepidum | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001422 | Chlamydia trachomatis | Eubacteria | Chlamydiae | |
| MMDBm0001449 | Chromohalobacter salexigens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001980 | Chromobacterium violaceum | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0000114 | acetobutylicum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000109 | Clostridioides difficile | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0000132 | Clostridium perfringens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001454 | Clostridium perfringens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001477 | Clostridium perfringens | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001455 | Clostridium tetani | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001479 | psychrerythraea | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0001967 | Corynebacterium diphtheriae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001486 | Corynebacterium efficiens | Eubacteria | Actinobacteria | Facultative aerobe |
| MMDBm0001485 | Corynebacterium glutamicum | Eubacteria | Actinobacteria | Facultative aerobe |
| MMDBm0001484 | Corynebacterium jeikeium | Eubacteria | Actinobacteria | Facultative aerobe |
| MMDBm0001495 | burnetii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001506 | Cupriavidus metallidurans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001505 | Ralstonia eutropha | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0002383 | Propionibacterium acnes | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001516 | Cytophaga hutchinsonii | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0001517 | Dechloromonas aromatica | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001518 | Dehalococcoides mccartyi | Eubacteria | Chloroflexi | Anaerobe |
| MMDBm0001519 | Dehalococcoides sp. CBDB1 | Eubacteria | Chloroflexi | Anaerobe |
| MMDBm0001525 | Deinococcus geothermalis | Eubacteria | Deinococcus-thermus | Aerobe |
| MMDBm0001524 | Deinococcus radiodurans | Eubacteria | Deinococcus-thermus | Aerobe |
| MMDBm0001548 | Desulfovibrio alaskensis | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001533 | Desulfitobacterium hafniense | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001541 | Desulfotalea psychrophila | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001547 | Desulfovibrio vulgaris | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001586 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000169 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001569 | Ehrlichia canis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001570 | Ehrlichia chaffeensis | Eubacteria | Proteobacteria | |
| MMDBm0001568 | Ehrlichia ruminantium | Eubacteria | Proteobacteria | |
| MMDBm0001567 | Ehrlichia ruminantium | Eubacteria | Proteobacteria | |
| MMDBm0001575 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001628 | Frankia sp. CcI3 | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001620 | Francisella tularensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001619 | Francisella tularensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001621 | Francisella tularensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001618 | Francisella tularensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000185 | Fusobacterium nucleatum | Eubacteria | Fusobacteria | Anaerobe |
| MMDBm0001636 | Geobacillus kaustophilus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001644 | Geobacter metallireducens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001968 | Geobacter sulfurreducens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001652 | Gloeobacter violaceus | Eubacteria | Cyanobacteria | |
| MMDBm0001654 | Gluconobacter oxydans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001657 | Granulibacter bethesdensis | Eubacteria | Proteobacteria | |
| MMDBm0001969 | Haemophilus ducreyi | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001659 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001705 | Haemophilus somnus | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001665 | Hahella chejuensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001979 | Helicobacter hepaticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001687 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001686 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002720 | Thiomicrospira crunogena | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001712 | Hyphomonas neptunium | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001713 | Idiomarina loihiensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001720 | Jannaschia sp. CCS1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001385 | Candidatus Koribacter versatilis | Eubacteria | Acidobacteria | Aerobe |
| MMDBm0001737 | Lactobacillus acidophilus | Eubacteria | Firmicutes | Anaerobe; microaerophile |
| MMDBm0001739 | Lactobacillus delbrueckii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001735 | Lactobacillus johnsonii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001762 | Lactococcus lactis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001734 | Lactiplantibacillus plantarum | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001738 | Lactobacillus sakei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001767 | Lawsonia intracellularis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001770 | Legionella pneumophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001769 | Legionella pneumophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001771 | Legionella pneumophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001775 | Leifsonia xyli | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001736 | Ligilactobacillus salivarius | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001786 | Listeria innocua | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001784 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001785 | Listeria monocytogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001796 | Magnetospirillum magneticum | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001284 | succiniciproducens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001799 | Maricaulis maris | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001809 | Mesoplasma florum | Eubacteria | Tenericutes | Facultative |
| MMDBm0001865 | Methylococcus capsulatus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001855 | Methylobacillus flagellatus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001884 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001915 | Mycoplasma capricolum | Eubacteria | Tenericutes | Facultative aerobe |
| MMDBm0001978 | Mycoplasma gallisepticum | Eubacteria | Tenericutes | Facultative |
| MMDBm0001905 | Mycoplasma genitalium | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0001910 | hyopneumoniae | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0001914 | hyopneumoniae | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0001913 | hyopneumoniae | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0001881 | Mycobacterium leprae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001911 | Mycoplasma mobile | Eubacteria | Tenericutes | Facultative |
| MMDBm0001909 | Mycoplasma mycoides | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0001883 | Mycobacterium avium | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001908 | Mycoplasma penetrans | Eubacteria | Tenericutes | Facultative |
| MMDBm0001906 | Mycoplasma pneumoniae | Eubacteria | Tenericutes | Aerobe; anaerobe |
| MMDBm0001907 | Mycoplasma pulmonis | Eubacteria | Tenericutes | Facultative anaerobe |
| MMDBm0001912 | Mycoplasma synoviae | Eubacteria | Tenericutes | Facultative |
| MMDBm0001886 | Mycobacterium sp. MCS | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001920 | Myxococcus xanthus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001928 | Neisseria gonorrhoeae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001930 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001929 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001936 | Neorickettsia sennetsu | Eubacteria | Proteobacteria | Aerobic |
| MMDBm0001977 | Nitrosomonas europaea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001941 | Nitrobacter hamburgensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001949 | Nitrosospira multiformis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001942 | Nitrosococcus oceani | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001940 | Nitrobacter winogradskyi | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0001950 | Nocardia farcinica | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001959 | Nostoc sp. PCC 7120 | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0001961 | Novosphingobium aromaticivorans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001973 | Oceanobacillus iheyensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001392 | Onion yellows phytoplasma | Eubacteria | Tenericutes | Aerobe |
| MMDBm0002659 | Synechococcus sp. WH 8102 | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0001394 | Candidatus Protochlamydia amoebophila UWE25 | Eubacteria | Chlamydiae | |
| MMDBm0001334 | Burkholderia xenovorans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002345 | Pasteurella multocida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002346 | Pectobacterium atrosepticum | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001390 | Candidatus Pelagibacter ubique | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002361 | Photorhabdus luminescens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002360 | Photobacterium profundum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002365 | Polaromonas sp. JS666 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002369 | Porphyromonas gingivalis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0002375 | Prochlorococcus marinus | Eubacteria | Cyanobacteria | |
| MMDBm0002371 | Prochlorococcus marinus | Eubacteria | Cyanobacteria | |
| MMDBm0002372 | Prochlorococcus marinus | Eubacteria | Cyanobacteria | |
| MMDBm0002373 | Prochlorococcus marinus | Eubacteria | Cyanobacteria | |
| MMDBm0002374 | Prochlorococcus marinus | Eubacteria | Cyanobacteria | |
| MMDBm0002395 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002389 | Pseudoalteromonas atlantica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002393 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002397 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002392 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002394 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002388 | Pseudoalteromonas haloplanktis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002396 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002415 | Psychrobacter arcticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002416 | Psychrobacter cryohalolentis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002429 | Ralstonia solanacearum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002434 | Rhizobium etli | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002435 | Rhizobium leguminosarum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001810 | Mesorhizobium japonicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002538 | Sinorhizobium meliloti | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002448 | Rhodopirellula baltica | Eubacteria | Planctomycetes | Aerobe |
| MMDBm0001204 | Rhodoferax ferrireducens | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002445 | Rhodococcus jostii | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002450 | Rhodopseudomonas palustris | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002449 | Rhodopseudomonas palustris | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002451 | Rhodopseudomonas palustris | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002452 | Rhodopseudomonas palustris | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002456 | Rhodospirillum rubrum | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002464 | Rickettsia bellii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002461 | Rickettsia conorii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002463 | Rickettsia felis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002460 | Rickettsia prowazekii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002462 | Rickettsia typhi | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002477 | Roseobacter denitrificans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002481 | Rubrobacter xylanophilus | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002482 | Ruegeria pomeroyi | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002483 | Ruegeria sp. TM1040 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002487 | Saccharophagus degradans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0548594 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550379 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002489 | Salinibacter ruber DSM 13855 | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0101577 | Schizosaccharomyces pombe | Fungi | Ascomycota | |
| MMDBm0002510 | Shewanella denitrificans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002513 | Shewanella frigidimarina | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002509 | Shewanella oneidensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002512 | Shewanella sp. MR-4 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002511 | Shewanella sp. MR-7 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002528 | Shewanella violacea | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002533 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001987 | Sodalis glossinidius | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0002547 | Sphingopyxis alaskensis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0778392 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002567 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002565 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002557 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002556 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002555 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002558 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002559 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002561 | Staphylococcus aureus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000425 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002560 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002562 | Staphylococcus epidermidis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002563 | Staphylococcus haemolyticus | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002564 | Staphylococcus saprophyticus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0002597 | Streptococcus agalactiae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002591 | Streptococcus agalactiae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002589 | Streptococcus agalactiae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002634 | Streptomyces avermitilis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002635 | Streptomyces coelicolor | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0696573 | | Eubacteria | Actinobacteria | |
| MMDBm0002590 | Streptococcus mutans | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0795844 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002588 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002593 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002587 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002600 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002598 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002599 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002601 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002595 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002585 | Streptococcus pneumoniae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002592 | Streptococcus pyogenes | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002586 | Streptococcus pneumoniae | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000281 | Streptococcus thermophilus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002594 | Streptococcus thermophilus | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0002654 | Sulfurimonas denitrificans | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002658 | Symbiobacterium thermophilum | Eubacteria | Firmicutes | Microaerophilic |
| MMDBm0002672 | Syntrophus aciditrophicus | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002352 | Pelobacter carbinolicus | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002663 | Synechococcus elongatus | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0002664 | Synechococcus sp. JA-3-3Ab | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0001989 | Synechococcus sp. JA-2-3B'a(2-13) | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0002660 | Synechococcus elongatus | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0002665 | Synechococcus sp. CC9311 | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0002661 | Synechococcus sp. CC9902 | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0002662 | Synechococcus sp. CC9605 | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0001991 | Syntrophomonas wolfei | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0882069 | Synechocystis sp. PCC 6803 | Eubacteria | | |
| MMDBm0002688 | Thermobifida fusca | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001963 | Thermotoga maritima | Eubacteria | Thermotogae | Anaerobe |
| MMDBm0001983 | Thermus thermophilus | Eubacteria | Deinococcus-thermus | Aerobe |
| MMDBm0001985 | Thermus thermophilus | Eubacteria | Deinococcus-thermus | Aerobe |
| MMDBm0002709 | Thermosynechococcus elongatus | Eubacteria | Cyanobacteria | |
| MMDBm0002719 | Thiobacillus denitrificans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002730 | Trichodesmium erythraeum | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0001220 | Anabaena variabilis | Eubacteria | Cyanobacteria | Aerobe |
| MMDBm0001975 | Tropheryma whipplei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001976 | Tropheryma whipplei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002733 | Ureaplasma parvum | Eubacteria | Tenericutes | Facultative |
| MMDBm0002739 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002741 | Vibrio parahaemolyticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002740 | Vibrio vulnificus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002742 | Vibrio vulnificus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001970 | Wigglesworthia glossinidia | Eubacteria | Proteobacteria | Na |
| MMDBm0002755 | melanogaster | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002759 | Wolinella succinogenes | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0002756 | malayi | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001972 | Xanthomonas citri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002764 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002763 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002761 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002765 | Xanthomonas oryzae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002762 | Xanthomonas oryzae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002771 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002772 | Xylella fastidiosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0098378 | Saccharomyces cerevisiae | Fungi | Ascomycota | |
| MMDBm0002780 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002778 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002045 | Zymomonas mobilis | Eubacteria | Proteobacteria | |