| MMDBm0393872 | Alloprevotella tannerae | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0805428 | Anaerotruncus colihominis | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001232 | Arcanobacterium haemolyticum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0676734 | Arthrobacter castelli | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0392079 | Bacteroides caccae | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392086 | Bacteroides cellulosilyticus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000039 | Bacteroides clarus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0395105 | Phocaeicola coprocola | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0395106 | Phocaeicola coprophilus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0395112 | Phocaeicola dorei | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392093 | Bacteroides eggerthii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392094 | Bacteroides eggerthii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392098 | Bacteroides faecis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392100 | Bacteroides finegoldii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392101 | Bacteroides fluxus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392196 | Bacteroides intestinalis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0395113 | Phocaeicola massiliensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392206 | Bacteroides oleiciplenus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392208 | Bacteroides ovatus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392248 | Bacteroides xylanisolvens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392211 | Bacteroides ovatus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0395117 | Phocaeicola plebeius | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392215 | Bacteroides pyogenes | Eubacteria | Bacteroidetes | Obligate anaerobe |
| MMDBm0392224 | Bacteroides salyersiae | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392261 | Bacteroides sp. 1_1_14 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392262 | Bacteroides sp. 1_1_30 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000054 | Bacteroides thetaiotaomicron | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392276 | Bacteroides sp. 2_1_22 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392277 | Bacteroides sp. 2_2_4 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392290 | Bacteroides sp. 3_1_23 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392291 | Bacteroides sp. 3_1_33FAA | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392292 | Bacteroides sp. 3_1_40A | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392300 | Bacteroides sp. 4_1_36 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392301 | Bacteroides sp. 4_3_47FAA | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392307 | Bacteroides sp. 9_1_42FAA | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392454 | Bacteroides sp. D1 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392455 | Bacteroides sp. D2 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392456 | Bacteroides sp. D20 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392457 | Bacteroides sp. D22 | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000053 | Bacteroides stercoris | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000055 | thetaiotaomicron | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392237 | Bacteroides timonensis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392239 | Bacteroides uniformis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000057 | Bacteroides vulgatus | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392247 | Bacteroides xylanisolvens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000058 | Bacteroides xylanisolvens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000064 | Bifidobacterium adolescentis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001287 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0002290 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648002 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001288 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0002230 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0001289 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0002078 | Bifidobacterium animalis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648030 | Bifidobacterium boum | Eubacteria | Actinobacteria | Facultative anaerobe, air+co2 |
| MMDBm0648061 | Bifidobacterium catenulatum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648069 | Bifidobacterium coryneforme | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648074 | Bifidobacterium dentium | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648082 | Bifidobacterium gallicum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000072 | Bifidobacterium catenulatum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000087 | Bifidobacterium mongoliense | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0648137 | Bifidobacterium pseudocatenulatum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000089 | Bifidobacterium pseudolongum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648159 | Bifidobacterium ruminantium | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0647984 | Bifidobacterium adolescentis | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0648174 | Bifidobacterium thermacidophilum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0000090 | Bifidobacterium thermophilum | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0662671 | Candidatus Blastococcus massiliensis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000096 | Brevibacillus borstelensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0663577 | Brevibacterium casei | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0663594 | Brevibacterium linens | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0663608 | Brevibacterium ravenspurgense | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0881918 | Candidatus Nitrososphaera gargensis | Not Available | Thaumarchaeota | Aerobe |
| MMDBm0685945 | Cellulosimicrobium cellulans | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0648901 | Corynebacterium ammoniagenes | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0648904 | Corynebacterium amycolatum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0001490 | Corynebacterium kroppenstedtii5 | Eubacteria | Actinobacteria | Facultative aerobe |
| MMDBm0649080 | Corynebacterium propinquum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0649135 | Corynebacterium tuberculostearicum | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0002160 | Corynebacterium ulcerans | Eubacteria | Actinobacteria | Facultative anaerobe |
| MMDBm0665710 | Dermacoccus nishinomiyaensis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0649955 | Dietzia cinnamea | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0397638 | Dyadobacter beijingensis | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0001564 | Dyadobacter fermentans | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0000148 | Dysgonomonas gadei | Eubacteria | Bacteroidetes | Facultative anaerobe |
| MMDBm0650438 | Gordonia rubripertincta | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0650453 | Gordonia terrae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0650454 | Gordonia terrae | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0881919 | Halococcus morrhuae | Not Available | Euryarchaeota | Aerobe |
| MMDBm0001729 | Kocuria rhizophila | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001732 | Kytococcus sedentarius | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001817 | Methanobrevibacter ruminantium | Not Available | Euryarchaeota | Anaerobe |
| MMDBm0000218 | Methanobrevibacter smithii | Not Available | Euryarchaeota | Anaerobe |
| MMDBm0001846 | Methanosphaera stadtmanae | Not Available | Euryarchaeota | Anaerobe |
| MMDBm0435884 | Methylobacterium mesophilicum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001859 | Methylobacterium populi | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001858 | Methylobacterium radiotolerans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001872 | Micrococcus luteus | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0000002 | Micromonospora aurantiaca | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0651046 | Mycobacterium avium | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0657325 | Mycolicibacterium fortuitum | Eubacteria | Actinobacteria | Microaerophile |
| MMDBm0000233 | Parabacteroides goldsteinii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394966 | Parabacteroides gordonii | Eubacteria | Bacteroidetes | |
| MMDBm0394968 | Parabacteroides johnsonii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394970 | Parabacteroides merdae | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0453897 | Paracoccus yeei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0393929 | Prevotella brevis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393932 | Prevotella bryantii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393934 | Prevotella buccae | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000860 | Prevotella copri | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393945 | Prevotella corporis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393952 | Prevotella denticola | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000245 | Prevotella denticola | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393954 | Prevotella disiens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393955 | Prevotella disiens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000247 | Prevotella intermedia | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000248 | Prevotella melaninogenica | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0393997 | Prevotella nigrescens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394012 | Prevotella pallens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000249 | Prevotella ruminicola | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0394042 | Prevotella veroralis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0002385 | freudenreichii | Eubacteria | Actinobacteria | Facultative |
| MMDBm0658815 | Rhodococcus hoagii | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002444 | Rhodococcus erythropolis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0658861 | Rhodococcus rhodochrous | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0461764 | Roseomonas mucosa | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0648739 | Scardovia inopinata | Eubacteria | Actinobacteria | Anaerobe |
| MMDBm0639412 | Schlesneria paludicola | Eubacteria | Planctomycetes | Facultative anaerobe |
| MMDBm0002641 | Sulfolobus solfataricus | Not Available | Crenarchaeota | Aerobe |
| MMDBm0000246 | Prevotella intermedia | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000763 | Prevotella bryantii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000923 | Bacteroides nordii | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0392190 | Bacteroides graminisolvens | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0658814 | Rhodococcus hoagii | Eubacteria | Actinobacteria | |